Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01592 ATGTCCCGGGGAACAACTTCAATCAAGTTAATGGAAGAAGTTCTCAACTTGGACCATGAGACATCCTGGTCGATTGTTGGTACCATAGTTTCTGTCAATGTGGGTTTGAAGGATTGGTTCAACGTATCGTGCAACACATGTTCCAAAAAAGTGCAGCCAAATAAGGACCGCTATTGGTGTGACCATTATAGAAAGGTGGGGTTTAATGGCACTCTCAGATATCGCCTTGCTGTCATCCTTACTGATGGTACCAGTTGTATTAAGGTGGCCTTATGGAATTCAGAAGCCAAAGCTATTGTTGAAAAATCAGCCAGTGAAATACGTGATCCAAATGGAAGGGTTTACAGTTTTTCTACCACTTTGGGTGGTGGTTCTCATGAAGGGGATCAAAGTTTTTCCACCACTTTGGGTGGTAGTTGCCAATTGGAAACTAAATCAAAAGCAAATGGGTTGGGTTTTACATCTCCATCGAAGGACTACCCAACTGAAAGCAAATATGAAAATGTCCATGCCAGTCCCACTAAATTGGTGGTCGGTGAGGTCGTCGAGAATGCTGCGATGGTAGGGATATGTACTCTAGATGGTCAAGGTTCCAGCAACAAGTCATTCAAGAGAAATGTTGGAAAGAGGAAGCTGGAGTAA 642 0.4315 MSRGTTSIKLMEEVLNLDHETSWSIVGTIVSVNVGLKDWFNVSCNTCSKKVQPNKDRYWCDHYRKVGFNGTLRYRLAVILTDGTSCIKVALWNSEAKAIVEKSASEIRDPNGRVYSFSTTLGGGSHEGDQSFSTTLGGSCQLETKSKANGLGFTSPSKDYPTESKYENVHASPTKLVVGEVVENAAMVGICTLDGQGSSNKSFKRNVGKRKLE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01592 213 SUPERFAMILY Nucleic acid-binding proteins 7 109 IPR012340 -
Aip02g01592 213 Gene3D - 3 152 IPR012340 -
Aip02g01592 213 Pfam Replication factor-A C terminal domain 42 108 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01592 Aip-Chr2 63300159 63306772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01592 39 121 Core DNA Replication Machinery Family AT5G08020 34.483 4.39e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01592 - K07466 ahf:112695129 283.878