Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01586 ATGGAAAGTGATGGTATGGAGCATCTTGTTGATGACAAAAGTGATGGTATGGAGCATCTTGTTGATGATGACAAAGGTGATGGTGTGGAGCATGTTGTTCATGATAAAAGTGATACTATGGAGCATGCGGATGATGATGATAGTGATGATTCTAGTAGTGACAGCGGTGATGATGATTTACAAGAGGATCAAGGTAAAGGGAATGATGTAAGTCACATGGAGGAGGCTACCATGTTTAAGAATAAAGCCGAACTGAGTAAAGAGGAAGTTTTGAAAATGGTGTTCGATACTCATGAAAAGGCCTATGATTTTTATGTGAGTTATGCTAAGTGTGTTGGATTTAGTGTCCGGAAAGGAGACGTGGCTCGTGATGATGATGGCAAATTGATAAGACGAAGATTTGTATGCAACAGGCAAGGCTTGAGAGACAAAAAGCATTACATGAGAATTGATAGAAAAAGGGATCAGAAACCAGAGACTAGGACGAATTGTCATGCAATGTTGAGTATTTACCTTGACAACCACACCTCAACTTGGAGAGTGAGAACCTTTGAAAAAGGCCACAACCATGAGCTAGCACCCGCTGGATTTGATTACATCGTGCCAAATACTCGTCGGTTAACAACTGCAAAAAAGGCACAAAGTGATGGTATCCGCATACATGGGTTCCTAACATTTCAAATCATGGGTTTTATGGTTGGTCAAGCTAGGGCTTTTGCTGGAGTTGAATTCTCAAAGGACTTGTACAGTTACATTGATAAACAAAGATGTCCTAAGATAGTTGATGGTGATGCACTTGCAGCTATTAGCTATTTGCAGGGTAAGGCTGATTCTGATCCGACGTTGTTTGCTAGGTACACCACTACAGATGATGATCAATTGGGAAACTTGTTTTGGGCTGATGGCTTAAGTCAAGTTGACTATGAGTACTTTGGGGATGTGGTTGGACTTGATACAAAATACAAAGAAAGCATGTACCACAGACGCTTAGTTATCTTTTCTGGTACTAATCATCATCGACAAACTTGTATTTTTGCATGTGCCTTACTAGGTGATGAGCGAGCTGACACATATAAATGGGCATTGGAGAATTTCTTAGATGCAATGGAAAAGAAGCACCCAAGTGCAGTGGTAACTGATGATAATGAGGCCATGAAAGAGGCAATTCAGGTGGTGTTCCCAAATGCTACCCATAGGCTATGTGCTTGGCATCTTCAAAAAGGTGCAGCATACAACATTAGGGATGCTGAATTTGTTGAGGCTTTCAAGAAATCTATTTATACCAACTTTGATCCTGATGAGTTTGAGGAGTATTGGCGTAACATGATACAAAAGTTTGAGGTATGTGACAGTATGTGGGTAGAGGAGACATATAAGAAGAAGGAAATGTGGGCCACGACTTACCTTCGTGATAAGTTCTGTTCTGGACTAAGAGCATCATCACGATGTGAGGGCTTAAACCCATTGATGAAGAAATATATCAAGGCAAGGCACAATATACTCGAATTGGTCCAACACTTTGAGCTTGCATTGAAGGAATTTAGGAACAATGAATTGGTAGCAGAGTTCAATTCCATGTACAATGAGCCTGTTTTGACAACTGCATTAGAATCAATTGAGCGCAAGGCTGCTAAAGTGTTTACGAGGGAAATTTTCAAAGAAGTGCAAAAAGAGTTAGAAGGGGCTGCTTTACTATTTGTTGTTGGATGTGAAAACCTTTCAACGACTGCCACGTTTAAATTGACTAAGTATGGCAAGCCTGGTTGGGAATACAAGGTGACATACGACAGAGAATCACAGAAATTTGAATGCCAGTGTTGCCTATGGAGTACCCATGGCATTCCCTGTAGTCACATATTTTGTGTTATGATTTATGAACATATTGCAGAATTACCCGAAAAGATGATTCTTAAAAGATGGACTCAAGCTGCAAAGTCTTTTAATGAGCTTCCGGATGAAGAAGATGAGGTGAATGATAAAAAGTTCTTGTTTCGTTATGGTGCATTATGTGCTGCAAGTAATTGGATGTCATTTCTGGCAGCAAGAAAATTGCATAATTTTCTTGAAACAAAAGATGAAATTTATAAAATCACGGCTAAGCTAGAGCATAAAGGCTGTATGGTGGATACCAGATCATTTTCTATTCCCAAGAATACCATGGATGACACGACCAAGGGTGCATCACTAACTTATAAGAATGGTAAGAAGCGGCGACGTTGCAAAGCTTGTAACAAGATGGGTCATTCAAAGTCTAGTTGTCCAAGGGTCAAGGACAGAAGGTCTCGAGGAGATGATCTCAGTTCGTCTTCAATGTCAGATAATCCTCGAAATGCGGGTCATGCCACAAATAGCGCAGTGGATCCTCCAAATACTGGTCCTGCAACACATAACACTCTGGATGATCCTCCAAATGCAGGTCCTGCAACAAATAACGAGGTAGGGCACCCTCCAACAGACTCATCAACCGCCATGACACAATCGCTAGCTGTGAATCATGCATCTGCAGCCTCTCGATTCGGGGTATGGGGACCCCAATTTCTTCTTCCTGGTCCTGGTCAACCATGCTTTGCTGCAAATATAGGTCACCAATACTATCTTGCAAATCAAGCAATATGTCGGAGGTCCGAATCCTCAATTCCAAGGCTTAGCGCAGCAAAAACGTGGCAAAGGTCGTGCTCGTCGTTGATCATATCTTTAGAAACATGGTTTGAAGTCTTGTTGAGAAATGTCACTAATCAAGGATGA 2745 0.4124 MESDGMEHLVDDKSDGMEHLVDDDKGDGVEHVVHDKSDTMEHADDDDSDDSSSDSGDDDLQEDQGKGNDVSHMEEATMFKNKAELSKEEVLKMVFDTHEKAYDFYVSYAKCVGFSVRKGDVARDDDGKLIRRRFVCNRQGLRDKKHYMRIDRKRDQKPETRTNCHAMLSIYLDNHTSTWRVRTFEKGHNHELAPAGFDYIVPNTRRLTTAKKAQSDGIRIHGFLTFQIMGFMVGQARAFAGVEFSKDLYSYIDKQRCPKIVDGDALAAISYLQGKADSDPTLFARYTTTDDDQLGNLFWADGLSQVDYEYFGDVVGLDTKYKESMYHRRLVIFSGTNHHRQTCIFACALLGDERADTYKWALENFLDAMEKKHPSAVVTDDNEAMKEAIQVVFPNATHRLCAWHLQKGAAYNIRDAEFVEAFKKSIYTNFDPDEFEEYWRNMIQKFEVCDSMWVEETYKKKEMWATTYLRDKFCSGLRASSRCEGLNPLMKKYIKARHNILELVQHFELALKEFRNNELVAEFNSMYNEPVLTTALESIERKAAKVFTREIFKEVQKELEGAALLFVVGCENLSTTATFKLTKYGKPGWEYKVTYDRESQKFECQCCLWSTHGIPCSHIFCVMIYEHIAELPEKMILKRWTQAAKSFNELPDEEDEVNDKKFLFRYGALCAASNWMSFLAARKLHNFLETKDEIYKITAKLEHKGCMVDTRSFSIPKNTMDDTTKGASLTYKNGKKRRRCKACNKMGHSKSSCPRVKDRRSRGDDLSSSSMSDNPRNAGHATNSAVDPPNTGPATHNTLDDPPNAGPATNNEVGHPPTDSSTAMTQSLAVNHASAASRFGVWGPQFLLPGPGQPCFAANIGHQYYLANQAICRRSESSIPRLSAAKTWQRSCSSLIISLETWFEVLLRNVTNQG 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01586 914 ProSiteProfiles Zinc finger SWIM-type profile. 591 627 IPR007527 GO:0008270
Aip02g01586 914 MobiDBLite consensus disorder prediction 767 823 - -
Aip02g01586 914 MobiDBLite consensus disorder prediction 42 58 - -
Aip02g01586 914 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 674 IPR031052 GO:0006355
Aip02g01586 914 MobiDBLite consensus disorder prediction 1 41 - -
Aip02g01586 914 Pfam MULE transposase domain 314 407 IPR018289 -
Aip02g01586 914 MobiDBLite consensus disorder prediction 751 766 - -
Aip02g01586 914 PANTHER OS03G0181600 PROTEIN 78 674 - -
Aip02g01586 914 SUPERFAMILY Retrovirus zinc finger-like domains 722 760 IPR036875 GO:0003676|GO:0008270
Aip02g01586 914 Pfam FAR1 DNA-binding domain 103 193 IPR004330 -
Aip02g01586 914 MobiDBLite consensus disorder prediction 740 823 - -
Aip02g01586 914 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01586 Aip-Chr2 62856266 62859359 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01586 MULE 1.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01586 - - adu:107477751 1734.15