Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01541 ATGGGGAACACTTGTGTTGGTCCTAGCATTAAAAATGGGTTTCTTCAGTCGGTTTCTGCGGCAATGTGGAGGTCGCAATCGCCAGATGAATTGGCATCCAATCGAGAAAGTGTAAAGGAGGAAGCAACCAATGAACCTGAATCTGGGTTGCCTGTCCAGAACAAACCTCCTGAGCAGTTAACTATGCCAAAACATGAGGCAAAAGAAAAATCAAAACCAGAATCAAAGTCAAAAGTGGAAACGGAACCGGAACAGGAGAAGAGTAAACACAGGAAACCAGCTTCTGTGAAGAGAGTTTCGAGTGCAGGGCTTCGTGTTGATTCTGTTTTACAAAGAGAGACTGGTAATTTCAAGGATTTCTTCAGTTTGGGAAGAAAACTTGGACAGGGACAGTTTGGGACAACATTTTTATGTGTTGAGAAGGCAACAGGACAAGAATTTGCCTGTAAATCCATTGCAAAGAGGAAGCTGGTAACTGACGAGGATGTCGAGGATGTGAGGAGAGAAATTCAGATAATGCACCACTTGTCTGGCCATCCAAATGTTATTTCCATTAAAGGTGCTTATGAGGATGCGATAGCGGTTTATGTTGTGATGGAATTATGTGCAGGTGGTGAGCTTTTCGATAGGATTATTCAGCGTGGACATTACACTGAAAGAAAGGCTGCCGATCTTATACGGACCATAGTTGGGGTTGTGGAAGCTTGTCATTCTCTTGGTGTGATGCATAGAGACCTTAAACCTGAGAATTTTCTTTTTGTGAATCAGCATGAGGATGCACTTCTCAAAACCATTGACTTTGGATTATCCGTGTTCTTTAAGCCAGGTGATATATTCAATGATGTGGTTGGCAGCCCATATTATGTTGCCCCAGAAGTTCTGCGAAAGAGGTACGGTCCTGAAGCAGATGTTTGGAGTGCTGGAGTTATCCTGTATATTCTTTTGAGTGGAGTTCCTCCATTTTGGGCAGAAAATGAACAAGGAATATTTGAACAGGTTCTGCGTGGTGATCTTGATTTCTCGTCAGATCCCTGGCCTGCAATTTCGGAAAGTGCTAAAGATTTAGTAAGGAAAATGCTTGTTCGGGATCCTAGAAGGCGGATGACTGCCCATCAAGTACTATGTCATCCATGGATTCAAGTTGATGGTGTTGCTCCAGACAAGCCACTTGATTCTGCTGTACTAAGTCGCCTGAAACAATTTTCTGCTATGAATAAACTTAAGAAAATGGCTCTTATAGTAAGTATCTTTATGCACTAA 1260 0.4246 MGNTCVGPSIKNGFLQSVSAAMWRSQSPDELASNRESVKEEATNEPESGLPVQNKPPEQLTMPKHEAKEKSKPESKSKVETEPEQEKSKHRKPASVKRVSSAGLRVDSVLQRETGNFKDFFSLGRKLGQGQFGTTFLCVEKATGQEFACKSIAKRKLVTDEDVEDVRREIQIMHHLSGHPNVISIKGAYEDAIAVYVVMELCAGGELFDRIIQRGHYTERKAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQHEDALLKTIDFGLSVFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPAISESAKDLVRKMLVRDPRRRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVSIFMH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01541 419 ProSitePatterns Protein kinases ATP-binding region signature. 127 154 IPR017441 GO:0005524
Aip02g01541 419 MobiDBLite consensus disorder prediction 22 99 - -
Aip02g01541 419 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 414 - -
Aip02g01541 419 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 65 414 - -
Aip02g01541 419 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01541 419 Gene3D Transferase(Phosphotransferase) domain 1 208 418 - -
Aip02g01541 419 MobiDBLite consensus disorder prediction 61 91 - -
Aip02g01541 419 Pfam Protein kinase domain 122 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01541 419 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01541 419 CDD STKc_CAMK 120 378 - -
Aip02g01541 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Aip02g01541 419 SUPERFAMILY Protein kinase-like (PK-like) 119 380 IPR011009 -
Aip02g01541 419 Gene3D Phosphorylase Kinase; domain 1 123 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01541 Aip-Chr2 57493327 57501137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01541 1 414 EF-hand Containing Proteins AT5G04870 76.126 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip02g01541 Pkinase 1.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01541 K13412 - gmx:100797449 736.487