Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01539 ATGATGACAATGATGAAGCGCCCGATGCTGCGGAGAATGGAGTTGCGGGAGCAAGATGACTACGAGGTTGTGAGGAAGATCCTCAAACTCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTGCATAATCTTTGTGGAGGTCCCAATGTTATAAAGCTACTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTTCTCTACCCCACCCTGTCAGATTATGATATTCGATATTATATCTATGAACTTCTAAAGTCTTTGAAGATAATACAATCAAGGCAAGGAGATATTGGGAACTACTACGGTGTTCAGCTTCTTGATGCTTCAGTGACAAAATACCAAGATTATGAGACACGTGGAGTGGAGGGATTGGGTGAGAGGTTAGAGGAAAGGGTCAAAGTTCCCTTCAAATCTGAAGGGAAGGGAAACTTCAGAACAGTGAGCTTCAAGTTCAAAGCAGTTGCACCAAGAACAAGACTCACATTTTACAGCTCCTTTTACCATACCAGAATTGATGATTATGGATCTCTCTGTGGCCCTGTTCTTGACCAGGGAGGTAGTCTGAGATCAAACGGCTCTCCTTTTCATCACACTCGTATCGTACCTCTGTCGATCTTAAGGACAAGTGGAGCAATTTCCTCAAGGCTAGCTTTGCTCAGGCACCTGCAAATGAAGGGGAGTAGAAGCAAAATTCTAGCAGGTACCTGTGAAACACTGCCTGAAGAGGTACTTGGGAAGATGGGAGCACCTCCAAAGAGTGATGTGCCGATTATTACACCCAATGAGCTACCTGAGGTTGCTGGTTTATTGCTTGGATTTCCAACGAGATTTGGACTCATGGCTGCTCAGTTTAAGGCATTCTTGGATGCAACTGGAGGCCTATGGTGTACACAGGCACTAGCAGGAAAGCCTGCTGGAATTTTTTACAGCACCGATTCTCAAGGAGGCAGACAGGAAACCACCCCATAA 1014 0.4389 MMTMMKRPMLRRMELREQDDYEVVRKILKLVKKKKLKREIKILHNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKSLKIIQSRQGDIGNYYGVQLLDASVTKYQDYETRGVEGLGERLEERVKVPFKSEGKGNFRTVSFKFKAVAPRTRLTFYSSFYHTRIDDYGSLCGPVLDQGGSLRSNGSPFHHTRIVPLSILRTSGAISSRLALLRHLQMKGSRSKILAGTCETLPEEVLGKMGAPPKSDVPIITPNELPEVAGLLLGFPTRFGLMAAQFKAFLDATGGLWCTQALAGKPAGIFYSTDSQGGRQETTP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01539 337 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 250 337 - -
Aip02g01539 337 Pfam Protein kinase domain 18 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01539 337 Gene3D Phosphorylase Kinase; domain 1 18 73 - -
Aip02g01539 337 SUPERFAMILY Flavoproteins 252 336 IPR029039 -
Aip02g01539 337 SUPERFAMILY Protein kinase-like (PK-like) 18 108 IPR011009 -
Aip02g01539 337 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 250 337 - -
Aip02g01539 337 Gene3D - 232 337 IPR029039 -
Aip02g01539 337 Gene3D Transferase(Phosphotransferase) domain 1 74 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01539 Aip-Chr2 56765539 56770414 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Aip02g01539 Pkinase 1.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01539 K03809 - gmx:100805113 163.696