Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01536 ATGGCTCAGCCGTCATGCTCAGCGGCGCAACTGGCACAATACTTCGGCCCCAACGCCACCAACGCTGCAGCCGCTGCAAGTCTCATCTGCGATCAGTTCACCGCCGTGAGTATGCAGTACAAAGACACCAAGCACGCAGTGGACAGCACCTACCTCCTCTTCTCAGCCTATCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTTACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTATTCGGTTTTGCCTTTGCTTTCGGCGTCCCCTCCAATGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGCAAGTTCCTTCAGAAGCTCAGGATTTTGACTACAGCAACTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCTGGCATCACCAGCGGCTCTATCGCGGAGCGGACGCAGTTCGTCGCTTACCTCATCTACTCATCCTTCCTCACTGGCTTCGTCTACCCCGTTGTGTCGCATTGGATCTGGTCCACCGATGGGTGGGCCAGTGCCTTCAACACAGGGAACCTCCTCTTCGGATCTGGAGTCATCGATTTTGCGGGCTCCGGAGTCGTTCACATGGTCGGTGGGATTGCCGGTTTATGGGGTGCCTTAATTGAGGGGCCCAGAATAGGCCGTTTCGATCACACCGGCCGAGCGGTGGCTTTACGTGGGCACAGTGCATCATTGGTGGTACTTGGTACTTTCATGCTCTGGTTTGGTTGGTATGGATTTAACCCAGGCTCTTTTAACAAGATTCTAGTTTACTACGACGAATCTGGCAATTATTATGGTCAATGGAGTGCTGTTGGTAGGACCGCAGTAACTACAACCTTAGCCGGTTGTACGGCCGCCCTAACAACACTTTTTGGGAAAAGGATATTGTCTGGTCACTGGAACGTGACTGATGTTTGTAACGGGTTGCTAGGCGGGTTCGCAGCGATCACGGCCGGATGCTCTGTCGTGGAGCCTTGGGCTGCAATTGTGTGCGGCTTTTTTGCCTCCTTGGTTTTGATTGGCTGCAATAAATTGGCTGAAAAAGTCAAATATGACGACCCGTTGGAGGCCGCTCAGCTTCATGGCGGCTGCGGCGCGTGGGGTGTGATTTTCACCGCTCTCTTTGCGAAGAAGGAGTATGTGAAACAGGTCTACGGGTCGGGTCGGGGGCACGGGCTGTTGATGGGTGGTGGCGGAAAACTGCTGGCGGCGCATGTGATTCAGATTCTGGTTATTACTGGTTGGGTGAGTGCTACAATGGGTCCACTTTTCTTTGTTTTGAATAAGATGAAGTTGCTTCGGATCTCACCGGAGGATGAACTCGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCTTATGCTTACGAGGACGATGAATCGCACAAGCATGGGATTCAGTTGAAAAGAATTGAGCCAAACGCTTCCTCAACTCCTACCACAGAGTGA 1506 0.5425 MAQPSCSAAQLAQYFGPNATNAAAAASLICDQFTAVSMQYKDTKHAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGVPSNGFIGRHFFGLKQVPSEAQDFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSTDGWASAFNTGNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVYYDESGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFFASLVLIGCNKLAEKVKYDDPLEAAQLHGGCGAWGVIFTALFAKKEYVKQVYGSGRGHGLLMGGGGKLLAAHVIQILVITGWVSATMGPLFFVLNKMKLLRISPEDELAGMDLTRHGGFAYAYEDDESHKHGIQLKRIEPNASSTPTTE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01536 501 Gene3D Ammonium transporter AmtB like domains 26 492 IPR029020 -
Aip02g01536 501 SUPERFAMILY Ammonium transporter 45 454 - -
Aip02g01536 501 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aip02g01536 501 Pfam Ammonium Transporter Family 51 473 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip02g01536 501 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 495 - -
Aip02g01536 501 TIGRFAM amt: ammonium transporter 48 473 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip02g01536 501 PANTHER AMMONIUM TRANSPORTER 5 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01536 Aip-Chr2 56466747 56468734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01536 5 499 Inorganic Solute Cotransporters AT4G13510 80.396 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01536 K03320 - gmx:100818774 835.484