Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01522 ATGGATTCCTTGCTCCCACATTTTTGTAGGAATTCAGGGGCTTTCAGAGAAGAGAAGCAGTTAGGGTTTTCATCCAACTGCAATCCCTGCCATTCTCATCCCCTTTCTCTGCTGCAAATTTCTGCGACCTGCTTCCGCCGACGCGCCACGCCTCCGCCGCCGCTATACATTTTTTCTAGCCGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG 405 0.4667 MDSLLPHFCRNSGAFREEKQLGFSSNCNPCHSHPLSLLQISATCFRRRATPPPPLYIFSSRTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01522 134 SUPERFAMILY RING/U-box 81 127 - -
Aip02g01522 134 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 59 133 - -
Aip02g01522 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 132 IPR013083 -
Aip02g01522 134 PANTHER PROTEIN, PUTATIVE-RELATED 59 133 - -
Aip02g01522 134 Pfam Zinc finger, C3HC4 type (RING finger) 80 126 - -
Aip02g01522 134 ProSiteProfiles Zinc finger RING-type profile. 82 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01522 Aip-Chr2 55172697 55173549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01522 82 129 C3H Transcription Factor Family AT3G06140 37.500 9.46e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01522 - - ahf:112730063 171.014