Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01519 ATGGCGAACAAACTGAGCGCTGTTATTATCATGGGGTTTGCCATCTTTAGCCTTGTTTCGGTGACATCCGCTTTTTCGGGAACAGCAACTTACTATACAGTTTACACTCCATCCGCATGCTACGGGTACGAGGACGAAGGAACGATGATTGCAGCTGCAAGCGAGGGAATATACAACAATGGAGGTGCATGTGGCAAAATGTATAAGATCACATGCACAGGTGCGACCAACGCCGGCGTCACTCAACCGTGCACCGGCGCCAGTGTTACCGTCAAGGTTGTCGATCTTTGTCCCTCTCCAGGCTGCCAGGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTCAGATAGCTAACACCAATGCTGGAAAAGTTTATATTGACTATACCCCGTAA 393 0.4835 MANKLSAVIIMGFAIFSLVSVTSAFSGTATYYTVYTPSACYGYEDEGTMIAAASEGIYNNGGACGKMYKITCTGATNAGVTQPCTGASVTVKVVDLCPSPGCQGTFDLSQEAFSQIANTNAGKVYIDYTP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01519 130 Pfam Lytic transglycolase 51 128 IPR009009 -
Aip02g01519 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 129 IPR044206 GO:0009627|GO:0048046
Aip02g01519 130 SUPERFAMILY Barwin-like endoglucanases 14 129 IPR036908 -
Aip02g01519 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 4 129 - -
Aip02g01519 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 130 IPR007112 -
Aip02g01519 130 Gene3D - 23 130 IPR036908 -
Aip02g01519 130 SMART dpbb_1 50 128 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01519 Aip-Chr2 55103131 55110734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01519 47 128 Expansin Gene Family AT2G40610 32.979 2.38e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01519 - - ahf:112743758 250.366