Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01516 ATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAACCTTCATTTCAGGAGTTACTAAGCCAATCAGAAGAAGAATTCAGTTATGATCACCCAACTGGCGGTCTCACTATTCCTTGCAGCGAGCATACATTCCTGAACCTCACTTGTGAATTAAGTGGCCAGTATGAAATGGGGATCACAAACCGCTTCTGTTTCTCTCCGACATACACTGCTAAATGCCCCTTTGGGACTTCCACAGATTTAGAAGTTGCTTGGCTAGCTGAGAATGATGATGTCCTTCAAATAACAGGTATTAGAAAAGCAACAAAGAGCAATGATGTCCCAAAAGGCTATCTTGCAGTTTATGTTGGAGATAAAATGAAGAGGTTTTTAATTCCTATATCATACTTGAACCAACCTTTGTTTCAAGACTTGCTAAACCAAGCAGAAGAAGAATTCGGTTATGATCATCCGAATGGCGGTCTCACAATTCCATGCGAGGAGGATGAGTTCTTAAACCTCACTTCTCACTTGAGTAGGCTATAA 528 0.411 MRRFVIPVCYLNQPSFQELLSQSEEEFSYDHPTGGLTIPCSEHTFLNLTCELSGQYEMGITNRFCFSPTYTAKCPFGTSTDLEVAWLAENDDVLQITGIRKATKSNDVPKGYLAVYVGDKMKRFLIPISYLNQPLFQDLLNQAEEEFGYDHPNGGLTIPCEEDEFLNLTSHLSRL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01516 175 Pfam Auxin responsive protein 1 50 IPR003676 GO:0009733
Aip02g01516 175 Pfam Auxin responsive protein 102 170 IPR003676 GO:0009733
Aip02g01516 175 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 53 IPR003676 GO:0009733
Aip02g01516 175 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 100 173 IPR003676 GO:0009733
Aip02g01516 175 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 53 - -
Aip02g01516 175 PANTHER AUXIN-INDUCED PROTEIN 10A5 100 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01516 Aip-Chr2 54906769 54909903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01516 1 45 Calmodulin-binding Proteins AT3G43120 48.889 9.33e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01516 K14488 - gmx:112997918 179.874