Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01501 atggtaccggaaaaagcgtggcagCACCACCCTCGCTGCGTCGTTAGCCTCCGCTCCCTCTCCGCCTCGTTTCCTCGTCGCCGTTACCAGCATCCTTACCGTCAGCGTCAGCGCCAATTGCTTTCCGCGTCTCTTGCTTGGTGTCGGAGCTCGGAGGCGGCAACTGTTTTCTGCGTCTCTTGCTCGGTGTCGATGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCGAAGGCATTTGCTGCTAATTCAAATAAGAAGGTGGTGAAGTATGCTCGCAGGGAGGATGCTAGTtctggaaTTGCTCCATCCTGGTTCATTCACTTGGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTATGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGTTGTTGATCCATACACGAGATATGGGCCCAAAGGAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCATCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGCATTTTTTTCTTCCTCTTTCACACCCTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGAGATTGGGATTCTAGCTGATGGCACCTTGGCTCTGAGACAAGTTCTAATTCAGGTTCCAGGTATTGTATTTGCAAGAGGACCTGCTGTGACTGTGTTGATACTTCTGGAATCAGATGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTGAAAAGGAGACTGGCATAAAGTTCAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCAACAGTAGATTATAAGAGACCAACCTATGAAGAAGTTGAAAACCTCCAAGCCTTACTTCCAAGGGAGTGCAATATCTGCCAAATGCAAATCGGCGAAATGGCTAGTATTAGAATGGATAACTTGAACCCTTAA 1380 0.4449 MVPEKAWQHHPRCVVSLRSLSASFPRRRYQHPYRQRQRQLLSASLAWCRSSEAATVFCVSCSVSMDWYNLEKSKQVKAFRCGEYDECIEKAKAFAANSNKKVVKYARREDASSGIAPSWFIHLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLWPLGHLELDLPEAPTIKAPRLPPLVVDPYTRYGPKGEITHLFRTPESKVAVEGRVQFDLLQVSFTGSMEVGREIMHAAASINLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKGEICAFFSSSFTPCRNAIDSSLFKQWLHNLQSEIGILADGTLALRQVLIQVPGIVFARGPAVTVLILLESDGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGTAVEKETGIKFKLEDMVDLTAFLDSSTGCRFFPSPTVDYKRPTYEEVENLQALLPRECNICQMQIGEMASIRMDNLNP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01501 459 SUPERFAMILY ALDH-like 217 282 IPR016161 GO:0016491
Aip02g01501 459 SUPERFAMILY Nudix 328 387 IPR015797 -
Aip02g01501 459 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 247 283 IPR016163 GO:0016620
Aip02g01501 459 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 285 324 - -
Aip02g01501 459 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 324 417 - -
Aip02g01501 459 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 310 418 - -
Aip02g01501 459 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 216 246 IPR016162 GO:0016491
Aip02g01501 459 Pfam Aldehyde dehydrogenase family 216 281 IPR015590 GO:0016491
Aip02g01501 459 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 285 324 - -
Aip02g01501 459 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 324 417 - -
Aip02g01501 459 Pfam Oligosaccharyltransferase subunit Ribophorin II 117 203 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01501 Aip-Chr2 53474532 53481303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01501 211 285 Aldehyde Dehydrogenase Gene Family AT3G24503 69.333 3.21e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01501 K18447 - ahf:112775503 460.299