Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01445 ATGGCTTGTGTCTTTGTTGTTTTGTTCTTAATCAAGAGCAAGCAGAATTCTAGCATAGATCCACATGGCCATCATCTTGCAACAGTGGGATTTAGAAAATTTAGCTATTCTGAGCTAAAAAAGGCGACAAAAGAATTCAGCCAAGAGATTAGAAGGGGTGCAGGAGGCATTGTATACAAAGCTATTTTGTCTAATCAAAGAATTGCTGCTATAAAGAAACTCAATAATGCTATGCAAGGAGAAGGTGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATCGGCTATTGGTGTATGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTCGATCAGAGCAAGAGGTATAACATCGCTCTCAAAACAGCAAGAGGTTTGGAATATTTACATGAAGAATGCTTGGAACGGATTTTGCATTGTGATATAAAACCTCAAAATATTCTCCTGGATTCAAATTATCAACCCAAGGTTGCAGATTTTGGATTGTCCAAGTTATTGAACAGGGATGTTCTCAATAACGATCGCAATTTCTCAATGATAAGAGAAACTAGAGGGTATATGGCGCCTGAGTGGGTTTTCAAACTAGCAATTATTAGAGCCAAAGGTGAAGAACCTGGAATCAAAGGCAAATCGACCAATATGGGATACAAAATCATGGACAAGACCATGTTCTTGTTGAACACTCGCCGATTGAAACATGGTTTTTGTTCCGTGTTACTCTGCCGAGAAGCAGGTTGCGCGGTGGCAGAAGCAGGGAGCGGCGGCGGAAGTAGGGCGCGGTGGCGGCAGCAGGTTGCAGCGGTGGCGGAGGCGTGTTGCGGCGGCGAGGATATGCGAACGAGATTTGCAGCAGAGAAAGAGGATGAGAATGGCAGGGATTGA 951 0.4343 MACVFVVLFLIKSKQNSSIDPHGHHLATVGFRKFSYSELKKATKEFSQEIRRGAGGIVYKAILSNQRIAAIKKLNNAMQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDQSKRYNIALKTARGLEYLHEECLERILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLNNDRNFSMIRETRGYMAPEWVFKLAIIRAKGEEPGIKGKSTNMGYKIMDKTMFLLNTRRLKHGFCSVLLCREAGCAVAEAGSGGGSRARWRQQVAAVAEACCGGEDMRTRFAAEKEDENGRD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01445 316 Gene3D Transferase(Phosphotransferase) domain 1 119 227 - -
Aip02g01445 316 SMART serkin_6 44 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01445 316 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 221 - -
Aip02g01445 316 SUPERFAMILY Protein kinase-like (PK-like) 19 218 IPR011009 -
Aip02g01445 316 Gene3D Phosphorylase Kinase; domain 1 10 118 - -
Aip02g01445 316 Pfam Protein kinase domain 47 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01445 316 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 221 - -
Aip02g01445 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Aip02g01445 316 ProSiteProfiles Protein kinase domain profile. 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01445 Aip-Chr2 42215384 42216637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01445 27 218 Receptor kinase-like Gene Family AT1G66980 42.424 1.21e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip02g01445 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01445 - - ahf:114924904 533.102