Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01442 ATGTTGCAGGATGTTATTCACCCGCCACCACCGCCACTGTCGCCGTTGCCATCGCCAGCCCAACCTCCAACCGAGCAAATCTCCATTGAGGAGATTTCGAGCCCAATCAGCGCCCGAATCTTCGAACTCTGCGACGCCGAGTTGTTCCCGGAGGCGGGTCTTCAGAGCTCTGACGTTACCTCAACCTCAAACTGTTGCTTTGAAGAGGCACAATACAAGACCAATACAGTCACCACACCAACTAGTACAGCACAAGATATAACTGCCTCGGCAGCGGCCGTTGCGGCCAATAACAATATTAACAAACCACCGGACAGCTGTAACAACCTTTCGGTTATCTTTGACTCCCAAGAAGAGCTTGACAATGACATCTCTGCTTCCATAGACTTCTCTTCTTCTCCAGCCGCAGCTTTTCCGGTTCCATCTCTTCTCCCAAATATCACAACTCAGCCGGAACAATTCGACTTCTCTTCGCCTTCGGTTCTCAAGGGTCTCCCTCATCAGTATCCAACTGACACTGCTACTACTGTTGTTGTTCCACCACTTATGGGGAATCCATTAGTACCTTCTGTTTTCGAAGATGAATGCATGTCTTCAATGGCTTCTTATGTTCCTATTAACTCTTCTTCCGCACCTTCTTGCTCTTATCTCAGCCCTGCTGGCTTAGGAGTGTTCATGCCTCCTCTTACTACCGCCTTATCTGCTGATTCTGCCTTGTTTGGTGGCAACATTCTACTCGGTTCGGAACTTCAAGCTCAAGAAATAGATTACCAAGGAGAAAATGGTGGAATATTTTGTACAGATTCAATTCAGAGGGTGTTTAATCCACCAGATCTTCAGACACTTAGTAGTGAGAGTCAGCAACTTGTACCTGGTTCTGGAGGCTCGGCCACTTTGGCACCAGAGATCTCAAACTTGGAGGACTCTACCTTAAAAGTTGGAAAACTTTCTGTTGAGCAAAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTTAGCAAGAAAATCAAGTATGCCTGCCGCAAAACTCTGGCTGATAGCCGACCCCGAGTTCGAGGAAGGTTTGCAAAGAATGATGACTTCGGAGAGAACCATAGACCAGCTTGTAGCAATCATGAAGAAGATGATGAAGAAGAAATAGTTGTGAAGGAAGATGATGATTTGGTCGATTCCTCAGATATCTTTGCACATATAAGTGGTGTGAACTCCTTCAAGTGCAACTATTCCTCCATCCAATCCTGGATTTAA 1263 0.4568 MLQDVIHPPPPPLSPLPSPAQPPTEQISIEEISSPISARIFELCDAELFPEAGLQSSDVTSTSNCCFEEAQYKTNTVTTPTSTAQDITASAAAVAANNNINKPPDSCNNLSVIFDSQEELDNDISASIDFSSSPAAAFPVPSLLPNITTQPEQFDFSSPSVLKGLPHQYPTDTATTVVVPPLMGNPLVPSVFEDECMSSMASYVPINSSSAPSCSYLSPAGLGVFMPPLTTALSADSALFGGNILLGSELQAQEIDYQGENGGIFCTDSIQRVFNPPDLQTLSSESQQLVPGSGGSATLAPEISNLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPACSNHEEDDEEEIVVKEDDDLVDSSDIFAHISGVNSFKCNYSSIQSWI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01442 420 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g01442 420 PANTHER CCT MOTIF FAMILY PROTEIN 29 420 - -
Aip02g01442 420 MobiDBLite consensus disorder prediction 360 378 - -
Aip02g01442 420 Pfam CCT motif 321 363 IPR010402 GO:0005515
Aip02g01442 420 MobiDBLite consensus disorder prediction 360 382 - -
Aip02g01442 420 MobiDBLite consensus disorder prediction 1 22 - -
Aip02g01442 420 ProSiteProfiles CCT domain profile. 321 363 IPR010402 GO:0005515
Aip02g01442 420 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 29 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01442 Aip-Chr2 41452478 41459316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01442 300 370 C2C2-CO-like Transcription Factor Family AT5G24930 39.437 3.52e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip02g01442 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01442 - - gmx:100807304 466.463