Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01439 ATGACCGTTGCACCACCCAGCTTGCCTTCATCTAACCCTCACACCCAGCCCTCTCTCTGTCGTACCCTTGTTGTTTCTCAACGGTCTCTCGCACCATCAACGCTGCTCCGTCTACGCACCCAGGAATCGGCGCTGCTCCGTCCACGCACCCTCGTCGGATTCGGAACCTCCATCGGCGAGGAGAAGAGGAAGAGGAAAACCTTAGAGGAGAAGCCCTCCGCCGATTCCGCAATCGAAGCTTCGGAGAAGAAGAGGAAGTACCACGAGTCAATTGAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGTACGAGAAGGTTGAGAAGATTAGGGAAGGAACCTACGGCATCGTTTACAAGGCTCGCGACTGCGTTACCAATGAGACCATCGCTCTCAAGAAGATTCGCCTTGAGCAGGAGGATGAAGGCATTCCTAGCACTGCAATTCGCGAGATTTCTCTCCTCAAGGAGATGCAGCATAGGAATATTGTTAGAAAATTGGAGGGTTTCTGGTGTTCATTGTGTGTGGTGTTTTTGGTAAAATTGAGATTTCTTTCGTTTGGTGTTTTTGGTGGAAAATTGAGGCTTCATTATAACTGGAGCGTGAAGGCCATCCGCAGAAAGACCACTGGCACTGGCAGGATGAGGTACCTCCGTCACGTGCCTTCCGATTCAAGAGCGGCTTCAGAGAAGAGTCTGAAATCAAGGGGTATTCGATTCCCTGGCCGTGACAACGGGAGCTTGGCGCCTATTTTCACTCCTCTGCGTTCGGTGTCTGAGGCTGAACTTGATCTTCCACACCAGACTCAGCATGATGATATTCCTGTGCAGATTTTTACTCCTGAACAAACTAAGGAAGCTTTTGATGTTGCTAGAAACAGCATTGAGCTTCTTTCTACTATGTTGTCTTCTTCTCCACAACAAGATGTCTTGCAGATTTCATATCTGAAAACTGTTATGGCTACTGAGCCAGCAGCTCCTGCTGAGCATAATGTTAGTTTGCTGACAATTCCAAGTGCAAAGACTCTTGGAGAATAG 1038 0.4884 MTVAPPSLPSSNPHTQPSLCRTLVVSQRSLAPSTLLRLRTQESALLRPRTLVGFGTSIGEEKRKRKTLEEKPSADSAIEASEKKRKYHESIEEEEQDSHPLCEYEKVEKIREGTYGIVYKARDCVTNETIALKKIRLEQEDEGIPSTAIREISLLKEMQHRNIVRKLEGFWCSLCVVFLVKLRFLSFGVFGGKLRLHYNWSVKAIRRKTTGTGRMRYLRHVPSDSRAASEKSLKSRGIRFPGRDNGSLAPIFTPLRSVSEAELDLPHQTQHDDIPVQIFTPEQTKEAFDVARNSIELLSTMLSSSPQQDVLQISYLKTVMATEPAAPAEHNVSLLTIPSAKTLGE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01439 345 Coils Coil 77 97 - -
Aip02g01439 345 ProSiteProfiles Protein kinase domain profile. 104 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01439 345 MobiDBLite consensus disorder prediction 61 98 - -
Aip02g01439 345 SUPERFAMILY Protein kinase-like (PK-like) 100 172 IPR011009 -
Aip02g01439 345 SMART serkin_6 104 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01439 345 Pfam Protein kinase domain 104 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01439 345 Gene3D - 180 236 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aip02g01439 345 PANTHER TOM1-LIKE PROTEIN 1 230 313 - -
Aip02g01439 345 SUPERFAMILY GAT-like domain 238 316 - -
Aip02g01439 345 Gene3D Phosphorylase Kinase; domain 1 101 179 - -
Aip02g01439 345 PANTHER TOM1-LIKE PROTEIN 1 230 313 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01439 Aip-Chr2 40619059 40621858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01439 103 165 Core Cell Cycle Gene Families AT3G48750 88.889 1.04e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Aip02g01439 Pkinase 3.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01439 - - aip:107616842 144.436