Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01424 ATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCAAATGATAATCAAGCCATATTGAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGCAACACTTTCAGGCTGCTCTCAAGGCTGGCAAACAAACACAAGATGGGAGAGATGAGGAAATCACAGCCCTTCGTGTGGAAATTCAGTATTGGATTCATTGTTTGAAATTTGGGGAAAGAAAGATGGGCCTCACGTTTCCAATTTCATATCATTTCATAGGAAGTTTTGCTTGCAAATGTAAAGGTTGCAATCATTGGAGGAGGATTGATGGGCTCTGGAATTCAAACAGCAAAAGGTTTGCTTATACTTTAATTTGCACTGGTGTTTTCATGTGTGTGGTAACATGTCTAGGACATATGGCAGCAGGTAGCATGAATGGTTATTGTCTCTCTCATGT 500 0.408 MRAVQLSTDHSTSIEEEVFRIRAEHPNDNQAILNDRVKGQLKVTRAFGAGFLKRQHFQAALKAGKQTQDGRDEEITALRVEIQYWIHCLKFGERKMGLTFPISYHFIGSFACKCKGCNHWRRIDGLWNSNSKRFAYTLICTGVFMCVVTCLGHMAAGSMNGYCLSH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01424 166 PANTHER PROTEIN PHOSPHATASE 2C 1 63 IPR015655 GO:0004722|GO:0006470
Aip02g01424 166 Pfam Protein phosphatase 2C 4 56 IPR001932 -
Aip02g01424 166 Gene3D - 1 77 IPR036457 -
Aip02g01424 166 PANTHER PROTEIN PHOSPHATASE 2C 32 1 63 - -
Aip02g01424 166 SUPERFAMILY PP2C-like 3 56 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01424 Aip-Chr2 39827160 39829659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01424 1 61 PP2C-type Phosphatase Gene Family AT2G46920 77.049 9.81e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01424 - - gmx:100786856 107.842