Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01406 ATGCCATTTGATGTCATATATATCATTATTGTTGTCTTGTACGGAGATACTGATGTAATATGTGGTGTAGCTTGGGAATTCTGGCCGCTGGAGCATATGGCTTGCCTCAATTTCGACTGCGAGTATTTTTATGGGGTACTAAACCTTCTGAGGTATTCTAATATTTTTCAGGTAAAGCAATGTGCGGAAATGTCACGGAAACTACGATTCTTCAAGGATCAAATCAATAAAGCCGGCATAATGACTTCTCATACTGCATTGCAACCAGAGATTGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTAATTGAAATGAATTCCAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTCGAATTCAAGATTGTATTGCAGAAGGTTTCGTTACGCCTTACTGACTTGGAGGCAACTTTGGATGTGGGGTTGAGGCACCGCAAAAAGGTTCTAGCTTCTGTAGGGGAACATCTATCAGACTGGATGAACATGGTATGA 513 0.4035 MPFDVIYIIIVVLYGDTDVICGVAWEFWPLEHMACLNFDCEYFYGVLNLLRYSNIFQVKQCAEMSRKLRFFKDQINKAGIMTSHTALQPEIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKVSLRLTDLEATLDVGLRHRKKVLASVGEHLSDWMNMV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01406 170 Pfam V-type ATPase 116kDa subunit family 57 135 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip02g01406 170 PANTHER VACUOLAR PROTON ATPASE A1 133 170 - -
Aip02g01406 170 PANTHER VACUOLAR PROTON ATPASE A1 55 134 - -
Aip02g01406 170 Coils Coil 93 120 - -
Aip02g01406 170 PANTHER VACUOLAR PROTON ATPASES 133 170 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip02g01406 170 PANTHER VACUOLAR PROTON ATPASES 55 134 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01406 Aip-Chr2 38086840 38088731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01406 132 170 Primary Pumps ATPases(2) AT2G28520 53.846 6.21e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01406 K02154 - gmx:100776037 135.576