Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01399 ATGACTGACTCAAGAAGATTAATCAAATCAGGATCTTGCCCACCTGTTCCTCTTCCTTCCTCACGTGGAGGTCATTGCTGCTCTCCTCAGTTCCTTGGTTCTTTCTACTCTCATCTCCCTTGTTTGGTTCCCCACGCGCTCCTTCTTCTTCGTTTGGCACCTGCTGCCATTCTTCCCTCCATTTTTGCAGTGGTCCTTAACTCCTTCTCCTCACCACTCACCGACGGTGATTTCGGCAGCATCTTGTTCCAACAACTCATCCGACGAGATTCGGAGATCTTGAACCACGATACGCTATTTTTCCTTGGGATTGAGAAAGTGTTCAGTGTTAACGAGTCTGTTCAGGCGGATCCAAGCCCACAAACAGCCTCACCTCTGACGACGACGGAGCCTGATTTGCATTGTCGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCGCATTGCCGATGAAGCAGAAATGTCTGACAGAGCAGACCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGTAGGGATGGAGTCGGACGATTTGGACGGCGCCGGAGGAATGTCTCACAATTATGCGGAAGACGAGTTTTACGCTATTGATTCAGTGGAGTCGATAGGTTGGATTGATTTTTTGAGCTTGAGTGAGGAGGATGTTCTCCGGTTTAATTTCGCAAATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTCCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGTCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCAAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGATGATGAATCAGGACGTTGGCACGTTGTGTACTTTTCAAACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGTGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGACGCGGAATCGTGTCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTATACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACGAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTTTCCATAATAACCGACGGTGACAGGCAAATGAAGTctgcgattgagcaagtttttccagaggctcaccatcgactctgcgcttggcatctACTCCGAAACGCCACTAGCAACATCGGAAAGCCCAAATTTACCAGGATGTTTAGGGATTGCATGCTTGGCGACTATGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAACACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACATCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGAGCACAAACCTGAAACAGCTGGAGCGGAGTGCAGCCGATAACTACACTCGTACAATATTCTATTTGTTTGTTCCCATTCTTGATAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATATGGCACTCCGGGAAAGGATTGGCGTGTTGTTGCAACGTCTGATATGAGGGAGGCCCGATGCACGTGCATAAGAATAGAATGTTTCGGAGTCACCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGTCGAGAAGGACCAAGGATACAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCCAGTTTGCAAGAGACATTGCCATGCTGATGCTAAATCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGAGGCCTGGCGCGAAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAAAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGACCGCCGCACAATGGAGTCATCTGGCACAGTTGCAGATGACATGGATTTGATGGACATTGACAAGCTCTATGATAACCTATCTGGCAATCTGTATGCGACCGCGGAGATTCCTTCATTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCGACTTCGCTGGGACCAACACGTCCGTGCCAGTCATGTCTCTCGCCGATTGA 2862 0.492 MTDSRRLIKSGSCPPVPLPSSRGGHCCSPQFLGSFYSHLPCLVPHALLLLRLAPAAILPSIFAVVLNSFSSPLTDGDFGSILFQQLIRRDSEILNHDTLFFLGIEKVFSVNESVQADPSPQTASPLTTTEPDLHCRVAGDEDTTGGVRIADEAEMSDRADHGVGSFEGEGSVGMESDDLDGAGGMSHNYAEDEFYAIDSVESIGWIDFLSLSEEDVLRFNFANVDIAFEFYQQYAKHHGSGARRSRSEKRGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWHVVYFSNAHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGVADKRWVQDMYERRHSWATTHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLHHFHRCLMFVRAKEVEADFECAKGDPVMSTNLKQLERSAADNYTRTIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDMREARCTCIRIECFGVTCEHIIAVLVLNNVHEIPRSLILSRRTKDTKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKFQFARDIAMLMLNHFENEDAGDTSFPPEGPPTEGGRGLARNPPRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPDRRTMESSGTVADDMDLMDIDKLYDNLSGNLYATAEIPSFQCSDSDTQAGFANSDFAGTNTSVPVMSLAD 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01399 953 MobiDBLite consensus disorder prediction 159 179 - -
Aip02g01399 953 ProSiteProfiles Zinc finger SWIM-type profile. 715 751 IPR007527 GO:0008270
Aip02g01399 953 MobiDBLite consensus disorder prediction 827 866 - -
Aip02g01399 953 Pfam MULE transposase domain 438 532 IPR018289 -
Aip02g01399 953 PANTHER OS02G0262500 PROTEIN 216 807 - -
Aip02g01399 953 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 216 807 IPR031052 GO:0006355
Aip02g01399 953 SUPERFAMILY Retrovirus zinc finger-like domains 854 889 IPR036875 GO:0003676|GO:0008270
Aip02g01399 953 MobiDBLite consensus disorder prediction 1 22 - -
Aip02g01399 953 Pfam FAR1 DNA-binding domain 229 318 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01399 Aip-Chr2 37641421 37645254 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01399 MULE 2.6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01399 - - aip:107647116 1508.81