Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01386 ATGATAACTATTGAGGAAATAGATGGGATGGATGTCATCTGTAGTGACAAAACTATAACCTTGACATTGAATAAGCTTAGTGTTGATAGAAACTTGATTGAGGTATTTGCTAAGGGTGTTGAGAAGGAGTATGTTATCCTTCTTGCTGCAAGGGCCTCTAGGACCGAAAATCAGAATGCTATAGATGCTGCAATTGTTGGGAAGCTTGCTGATCCAAAGGAGGTCCATTTTCTTCCATTCAATCATGTAGACAAGAGAACTGCTCTAACTTACATTGATTCTGATGGAAATTGGCACCGTGTGAGCAAAAGGGCTCCAGAGCAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCGGGAAGAAGGTTCATGCAATGATTGATAAGTTCACTGAGCGTGGACTTCAGTCTTTAGGTGTTGCAAGATTCATATTGTAA 438 0.4064 MITIEEIDGMDVICSDKTITLTLNKLSVDRNLIEVFAKGVEKEYVILLAARASRTENQNAIDAAIVGKLADPKEVHFLPFNHVDKRTALTYIDSDGNWHRVSKRAPEQIITLCNCKEDVGKKVHAMIDKFTERGLQSLGVARFIL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01386 145 PANTHER CALCIUM-TRANSPORTING ATPASE 1 142 - -
Aip02g01386 145 Gene3D - 26 142 IPR023299 GO:0000166
Aip02g01386 145 Gene3D - 11 25 IPR023214 -
Aip02g01386 145 PANTHER PLASMA MEMBRANE ATPASE 1 142 - -
Aip02g01386 145 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 20 143 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01386 Aip-Chr2 36857001 36857627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01386 1 142 Primary Pumps ATPases AT2G24520 75.168 6.14e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01386 K01535 - gmx:100794372 243.047