Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01382 ATGGCCGCAGCAGCAGCTAGACCCCTTGTCACCGTCCAACCCTTGGATGGCGACATGGCCACCGATGCCCAACCAACTGTCCCACTTCCCGATGTCATGAAGGCCGCCATTCGCCCTGACATCGTCACATTCGTCCACGACAACATTTCCAAGAACTCCCGCCAGCCCTACGCCGTCTCCCGCCGCGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGAACCGGGCGTGCTGTCTCCCGTATTCCCCGTGTTCCCGGCGGCGGAACTCACCGCGCTGGCCAGGGAGCTTTCGGAAACATGTGCCGCGGCGGGCGCATGTTTGCCCCTACCAAGATCTGGCGCCGCTGGCACCGCAAGATCAACGTCAACCAGAAGCGGTACGCCGTCGTTTCCGCCATCGCTGCCTCTGCCATTCCCTCACTAGTCGTCGCACGCGGCCACCGCATTGACACCGTGCCGGAGCTCCCTCTCGTCGTCTCAGATGCCGCGGAAGCCGTTGAAAAGACAAAGGAAGCGATCAACGTCTTGAAATCCATCGGAGCTTATTCCGACGCTGAGAAGGCAAAGGACAGCCACGCAATTCGCCCTGGGAAGGGGAAAATGCGTAACCGCCGATACATTTCAAGAAAGGGACCTCTGATTGTGTACGGAACCGAAGGAGCTAAGGCTGTTAAGGCGTTCCGGAACATTCCTGGCGTCGAAGTTGTGAACGTTGAGAGACTGAATTTATTGAAATTGGCGCCTGGTGGACACCTTGGCAGGTTTGTGATATGGACTAAGTCGGCATTCGAGAAGCTTGATTCGATTTATGGTTCGTTTGAGAAGCCGTCTGAGAAGAAGAAGGGGTACTTGCTTCCTAGGGCGAAGATGGTGAATGCAGATTTGGCTAGGATTATTAACTCTGATGAGGTGCAGAGTGTTGTAAGGCCGATCAAGAAGGAGGTTAAGAGGGCTACATTGAAGAAGAACCCTCTGAAGAACCTGAATGTCATGTTGAGGTTGAACCCTTATGCTAAGGCTGCTAAGAGGATGGCACTTCTTGCAGAGGCGCAACGCGTTAAGGCCAAGAAGGAGAAGCTTGACCAGAAGAGGAAGACTGTTTCCAAGGAGGAAGCTTCTGCCATCAGGGCCGCTGGAAAGGCATGGTATCAAACTATGGTTTCAGATTCTGATTACACTGAGTTTGATAACTTCTCTAAGTGGTTGGGTGTTTCACACGCTCTCTCATCGGATCGCCGGTCCCTCAAGCTCAATTGCCTATGGCGCTGCTTCTGTGACCTTCGTCACAACTCCTTTGAGCCATGTCGCGCTGACCTGCATGGAATCCTCATCGCCGCGAGTGGCGCGTTCAGATCCTTGACGTCTTGGTGCGAGTTCCCGCAGTCTGAGATCGCTGCGGAATGCGCTAGACCACGCTACAGTCTTCCCTGCATTAATTCCTCATCACTGCGACGCGCAGCTCTTCGTGCAACGAATCCTGGACGCGATCGGTCCCTCCCTGTTGAGCGCCTCTGGCCTGGTTGGTTACCTAGCAAAGTTCAATAA 1545 0.5508 MAAAAARPLVTVQPLDGDMATDAQPTVPLPDVMKAAIRPDIVTFVHDNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVVARGHRIDTVPELPLVVSDAAEAVEKTKEAINVLKSIGAYSDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVVNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYLLPRAKMVNADLARIINSDEVQSVVRPIKKEVKRATLKKNPLKNLNVMLRLNPYAKAAKRMALLAEAQRVKAKKEKLDQKRKTVSKEEASAIRAAGKAWYQTMVSDSDYTEFDNFSKWLGVSHALSSDRRSLKLNCLWRCFCDLRHNSFEPCRADLHGILIAASGAFRSLTSWCEFPQSEIAAECARPRYSLPCINSSSLRRAALRATNPGRDRSLPVERLWPGWLPSKVQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01382 514 Gene3D - 4 309 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aip02g01382 514 PANTHER BNAC03G35890D PROTEIN 3 405 - -
Aip02g01382 514 Coils Coil 343 370 - -
Aip02g01382 514 Pfam 60S ribosomal protein L4 C-terminal domain 281 353 IPR025755 -
Aip02g01382 514 MobiDBLite consensus disorder prediction 56 95 - -
Aip02g01382 514 SUPERFAMILY Ribosomal protein L4 14 268 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aip02g01382 514 MobiDBLite consensus disorder prediction 56 74 - -
Aip02g01382 514 Pfam Ribosomal protein L4/L1 family 27 267 IPR002136 GO:0003735|GO:0005840|GO:0006412
Aip02g01382 514 ProSitePatterns Ribosomal protein L1e signature. 121 147 IPR013000 -
Aip02g01382 514 PANTHER 60S RIBOSOMAL PROTEIN L4 3 405 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01382 Aip-Chr2 36585148 36593842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01382 1 406 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 83.251 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01382 K02930 - gmx:100779764 726.857