Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01381 ATGAACTCCAACAACACCACCTCCAATACTCAGTCAATGGTGACACCAACGCCAACTGCCACAACCGCCACCACCACCACTGCCACCGCCACTGATGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAGTCCAGAGAGAGCTGGACTGACGAAGAGCACGACAAGTTTCTAGAAGCTCTTCAGCTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGATCCAAAACAGTTATTCAGATCCGAAGCCATGCCCAAAAATACTTTTTGAAAGTTCAAAAGAATGGAACAGTAGCACATGTGCCTCCTCCTCGCCCTAAGCGCAAAGCCGCACATCCCTACCCACAAAAGGCATCAAAAAATGTTTTGATGGCACTGCCAGCATCCATTGCTTATGCTCCTTCGACAAATGGCCTTGCACCTGGGTATGCCACATGGGATGAAGCTTCTCTGTTGGTGAACACCGGATCAAATAAATCATTGACCTGTCAAGATGAACTCAGCAATCTTCATGGAAATGAAGGCATGCATATTTCTTTTAAATTATTGTTTGGGATAACACAGATTAGTAACAGCAATCTTAATGGTGTCGGGAACTCAACTAGAAAGCTATTGTCTTCTGAGATACCAAAGCAAGGGAAACCAGCGCCAGTTATTCATGGTTTGCCAGATTTTGCCGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCTGATACAAATAACCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGAATTTGAGCCGATGCAATTTTTTAATTTGTTAGGTAGGTCAAATTTGGAAGGAAGACTTGGGAGAATTTGCTTAGCCAGCAGTGAGGCATGA 921 0.43 MNSNNTTSNTQSMVTPTPTATTATTTTATATDASAKKVRKPYTITKSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLMALPASIAYAPSTNGLAPGYATWDEASLLVNTGSNKSLTCQDELSNLHGNEGMHISFKLLFGITQISNSNLNGVGNSTRKLLSSEIPKQGKPAPVIHGLPDFAEVYSFIGSVFDPDTNNHVQKLKEMDPINFETVLLLMRNLTVNLSSPEFEPMQFFNLLGRSNLEGRLGRICLASSEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01381 306 PANTHER PROTEIN REVEILLE 8 19 282 - -
Aip02g01381 306 PANTHER SWI/SNF COMPLEX-RELATED 19 282 - -
Aip02g01381 306 Gene3D - 51 98 - -
Aip02g01381 306 MobiDBLite consensus disorder prediction 1 37 - -
Aip02g01381 306 MobiDBLite consensus disorder prediction 1 33 - -
Aip02g01381 306 SMART sant 47 95 IPR001005 -
Aip02g01381 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
Aip02g01381 306 ProSiteProfiles SANT domain profile. 46 99 IPR017884 -
Aip02g01381 306 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Aip02g01381 306 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Aip02g01381 306 CDD SANT 50 93 IPR001005 -
Aip02g01381 306 Pfam Myb-like DNA-binding domain 48 93 IPR001005 -
Aip02g01381 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 95 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01381 Aip-Chr2 36506347 36510760 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g01381 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01381 - - adu:107474168 482.641