Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01378 ATGTCTTTCTTTTTTCACTGCTCAGGAGAGACAATTAGTCGTCACTTTCACAATGTCCTACATGCTATTCTATCGTTAGAGGGAGACTTCTTCAAGCAATCATCTGGTGAGGATGTTCCTTATGAAATACTTCATAATAGTCGATTCTATCCATTTTTTAAGGACTGCATTGGAGCCATAGATGGAACTCATAGTCGTGTGAAGGTACCAAGGGTAGAAGTCCCTTGTTTTCACGGAAGAAAAGATCACCCTATACAAAATGTGTTAGCTGCTTGTGGGTTTGATATGGAATTCACTTATGTGTTGTCTAGTTTGGAAGGAATTGCCTCTGACTCGAGAATTTTGAAAGATGCTCTAAGTAGGAAATATCCACTTCGAATATCTGAAGGAAAATTTTATCTAGGTGATGCTGGATTTATGCTAAAGCCTGGGATACTTACACCATATAGAGGTATTCGGTATCACTTAAAAGAGTATTTACGCGTCCCTCCCTCCTCCTCCATCCGCGACGCCGTTCTCCTGCCCCGCCATCCTTCTCGCGCAATCCGCGGCAGTGGCGCGTTCCTCGTCGCCAAGTCGCGAGTCCCAACCGTGGCGCTCTTCTCCATCAAAGAAGCAGCAGAAGTTCTATCACTATCAACAGGAATGGAAGAAGAGAGCGAATCGGTAAGAGTAAAGGACATCATTCTGAAGCGGAAGATCGGAAATGGGTCGTTCTCGGCGGTGTGGAGGGCGGAGCACAGAGGCACCGGCGAAGAGGTGGCAGTGAAACAGGTCTTCCTCTCCAAACTCAACCTTCGCCTTAAGTCATTGTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTTGATTTCTTCCAGTATGATGGGATAGATCAACTCAACTCAAGAATGGCATATACTGAACCTTACTTGAATCATAAGCTGTGCCCTCTTTCCAAGATTCAGCCCAAATGGAAATGTATAAGGTTGATATGGTTGTTGTTATTGATGGGAGCAGAATTTTGGGACTTGGAGATTGGAGTTCATGGAAATGGCAATCCATTGGGAAGCTTGATCTGTATGTTGCAGCTGCTGGGAAAAATCCTAAACGAGTTCACGCCCTGGGATGATTCCCTGAGACTCAGGCCATGTAAATGCAGTGCCAGTGAGGGAGATCCATCAAGCAGTGCTGCACAGGCAATAGGCTTGATAGCGGCAGGGAAGGAATTGCAAGGACTTAAAGCTCTGAATCTAAATAAATTATTGAGGGATTCTGAAAATTTTACTATCCAATACTATACCAAAAATGGATTATTGCTTAAGATTGTCTCATAG 1341 0.4467 MSFFFHCSGETISRHFHNVLHAILSLEGDFFKQSSGEDVPYEILHNSRFYPFFKDCIGAIDGTHSRVKVPRVEVPCFHGRKDHPIQNVLAACGFDMEFTYVLSSLEGIASDSRILKDALSRKYPLRISEGKFYLGDAGFMLKPGILTPYRGIRYHLKEYLRVPPSSSIRDAVLLPRHPSRAIRGSGAFLVAKSRVPTVALFSIKEAAEVLSLSTGMEEESESVRVKDIILKRKIGNGSFSAVWRAEHRGTGEEVAVKQVFLSKLNLRLKSLFHCELNFLSSVNHPNIVRLLDFFQYDGIDQLNSRMAYTEPYLNHKLCPLSKIQPKWKCIRLIWLLLLMGAEFWDLEIGVHGNGNPLGSLICMLQLLGKILNEFTPWDDSLRLRPCKCSASEGDPSSSAAQAIGLIAAGKELQGLKALNLNKLLRDSENFTIQYYTKNGLLLKIVS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01378 446 Pfam Protein kinase domain 231 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01378 446 ProSiteProfiles Protein kinase domain profile. 228 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01378 446 Gene3D Transferase(Phosphotransferase) domain 1 212 322 - -
Aip02g01378 446 ProSitePatterns Protein kinases ATP-binding region signature. 234 257 IPR017441 GO:0005524
Aip02g01378 446 SUPERFAMILY Protein kinase-like (PK-like) 224 322 IPR011009 -
Aip02g01378 446 Pfam DDE superfamily endonuclease 60 151 IPR027806 -
Aip02g01378 446 PANTHER NUCLEASE HARBI1-RELATED 3 164 - -
Aip02g01378 446 PANTHER UNCHARACTERIZED 3 164 IPR045249 -
Aip02g01378 446 SMART serkin_6 228 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01378 Aip-Chr2 36367320 36373912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01378 227 298 Core Cell Cycle Gene Families AT1G66750 36.986 2.25e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Aip02g01378 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01378 - - ahf:114925655 288.115