Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01373 ATGAAGATCTTTCTTTCTTTAAGGACATTGTCCTTTCTTTGTTGCCTTCTCTTCACTGCTAGTAACTTAGCATCTGAATCACACGCTTCAGTAACTTCGCAGGAGTTCCAATACTTCTGTGATGAGCATAGTATTACCATAGACATCGAAGGCAACTACACAACCAATAGCACCTACCATACCAACCTCAACACTCTTATGTCAAATATTCTCAACAACAAAGAAATCGATTACGGTTTCTACAATGTCTCATACGGCGAGTACCCAAACAGAGTGTACGCCATTGGACTATGTAGAGGAGACATTAAGCCGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCACGGCGGTTTGTCCGAATCGAAAGGTGGCGATCGGGTGGTACAACGACGAACTATGCATGCTGCGATACTCGAATCGCAGCATATTCCACCTGATGGACAATGGACCGGCTTATTACAAGAAAAGCGACAAAAACGCCACGGATTTGAATGAGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGCAAAGCTTCTTCTGGTGACTCTCGGTTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTGTTCAGTGCACGCCTGATTTGTCTGGAGAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTGTTGTAAGGATAGCATGGGTGGTAGGGTTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTCTATGGGCCAACGGCGTATACGCCACCTTCGCCACCAGCTCCGCAGCCCACCACCACCTCTGTAACTAACCCGTCTTCAGGAGAGGATGATAACACTGAAGATATGGAAATTGTTGAGTCATTACAATTTAACTTGGAGAGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGCTGTTTACAAGGGTATTCTCACTAATGGACAAGAGATTGCTGTAAAAAGGTTGGCAAGGAGTTCTGGTCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATTTGTACCCAATAAAAGTCTTGATTACTTTATATTTGATCCCACCAAGAGAGCAAATTTGGATTGGGAAAGCTGCCACAGAATCATTGGAGGTATTGCTCGAGGTCTTGTCTACCTTCATGAAGATTCTCGATTGCGTATTATTCATCGTGACCTCAAAGCAGCAAATATTCTTTTAGATGAAAAGATGAATCCTAAGATATCAGATTTTGGTACTGCAAAACTATTTGTTACAAGTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCAATTTTATGGACTATTTTCAATCAAGTCGGATGTGTATAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTGAGAATCCAGAGACTCTCATGAACTTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACATTGTAGATACCACATTAAGAAATGGTTCACAGAATGAAATAATTCGATGCATCCACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTCATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGGTCACACTCGCAGTACCTTCAGAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAAGACCAGCACAAGAATCAGTCAATGAAGCTTCAATTACTGATCCATATCCTCGCTAG 1893 0.402 MKIFLSLRTLSFLCCLLFTASNLASESHASVTSQEFQYFCDEHSITIDIEGNYTTNSTYHTNLNTLMSNILNNKEIDYGFYNVSYGEYPNRVYAIGLCRGDIKPEQCRTCLNQSRANLTAVCPNRKVAIGWYNDELCMLRYSNRSIFHLMDNGPAYYKKSDKNATDLNEFNTKLNDLLNGLKSKASSGDSRLKYAVGNFSLPNFDDVYGLVQCTPDLSGEDCDNCIAQSIERISKDCCKDSMGGRVVRPSCFMRFETSYQFYGPTAYTPPSPPAPQPTTTSVTNPSSGEDDNTEDMEIVESLQFNLESIRDATNDFSDANKLGQGGFGAVYKGILTNGQEIAVKRLARSSGQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRERLLVYEFVPNKSLDYFIFDPTKRANLDWESCHRIIGGIARGLVYLHEDSRLRIIHRDLKAANILLDEKMNPKISDFGTAKLFVTSQTHSNTNRIVGTYGYMAPEYQFYGLFSIKSDVYSFGVLVLEIVSGKKSSGNCQSENPETLMNFAWRNWKDGTISNIVDTTLRNGSQNEIIRCIHIALLCVQANEAHRPTMATVLLMLNNHSVTLAVPSEPAFLLNTGSNTSTKRPAQESVNEASITDPYPR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01373 630 Gene3D Transferase(Phosphotransferase) domain 1 392 595 - -
Aip02g01373 630 Gene3D - 154 261 IPR038408 -
Aip02g01373 630 Gene3D - 44 145 IPR038408 -
Aip02g01373 630 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Aip02g01373 630 MobiDBLite consensus disorder prediction 605 630 - -
Aip02g01373 630 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 286 608 - -
Aip02g01373 630 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 277 - -
Aip02g01373 630 Pfam Protein tyrosine and serine/threonine kinase 320 583 IPR001245 GO:0004672|GO:0006468
Aip02g01373 630 Pfam Salt stress response/antifungal 160 257 IPR002902 -
Aip02g01373 630 Pfam Salt stress response/antifungal 51 143 IPR002902 -
Aip02g01373 630 ProSiteProfiles Protein kinase domain profile. 316 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01373 630 SUPERFAMILY Protein kinase-like (PK-like) 298 586 IPR011009 -
Aip02g01373 630 SMART serkin_6 316 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01373 630 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Aip02g01373 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Aip02g01373 630 Gene3D Phosphorylase Kinase; domain 1 279 391 - -
Aip02g01373 630 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 286 608 - -
Aip02g01373 630 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 277 - -
Aip02g01373 630 MobiDBLite consensus disorder prediction 266 292 - -
Aip02g01373 630 CDD STKc_IRAK 322 588 - -
Aip02g01373 630 MobiDBLite consensus disorder prediction 605 623 - -
Aip02g01373 630 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01373 Aip-Chr2 36245241 36248935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01373 45 602 Receptor kinase-like Gene Family AT4G38830 47.455 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g01373 Pkinase 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01373 - - adu:107463438 1035.4