Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01366 ATGAAGGGGGTTAATAGCGAGCATATATCATATGATCAGTATGAGCAGGAGGAAGAAAAAGATGAGGAAGTTGACGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCAATTATAACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGACGAAGATGTATGCCATTTTTACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGATTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCAAAATAATTATGGCATTGGAAACTTTAAGAGAAAACCTACTCTCGAGACAAGGTGTGGCTGTAGTCAATGA 441 0.3968 MKGVNSEHISYDQYEQEEEKDEEVDVDYMDEDDTNVEPMFNYNGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFYFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFVCHREGFRPQNNYGIGNFKRKPTLETRCGCSQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01366 146 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g01366 146 Pfam FAR1 DNA-binding domain 83 145 IPR004330 -
Aip02g01366 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 145 - -
Aip02g01366 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01366 Aip-Chr2 35253178 35253618 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01366 FAR1 9.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01366 - - ahf:112723376 259.225