Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01351 ATGGCAACTGCTGCTCTGAAAGAGATTCTTCCACCGTCTTTGACTTCAGTATCCGATCAACCTCCTCTTTTTGATGGAACCACCAGGTTGTACACCAGTTATACTTGTCCCTTTGCACAACGTGTATGGATCACTAGAAACTACAAGGGACTACAAGAGAAGATCAAATTGGTTGCTATTGACCTTGGGGACAGGCCTGCTTGGTACAAGGAGAAAGTTTACCCTGAAAATAAGGTGCCATCATTGGAGCACAACGGTAAGGTCATTGGAGAAAGCCTTGATTTGATCAAATACGTAGATGCAAACTTCGAAGGCCCCTCTCTGGTTCCCAGTGATCCTGCAAAGAAGGAGTTTGGTGAGAAGCTGGTGTCTGAAGTTGATTCAGTCACCAGAGAGTTGTTCTCTGCCTTGAAAGGGGATGCTATACAACAAACAAGTTTTGTTTTTGATTCCTTGGAGAATGCTCTTGGTAAATTTGATGACGGTCCATTCTTTCTTGGTCAATTCAGTTGGGTGGATATTGCTTATATCCCATTTATTGAAAGATTCCAAGTTGTCCTTGCTGAGGTGTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAGAGCTTGGATTGAGGAGGTAAACAAGATTGATGCTTATGCACAAACAAGGACTGATCCAAAGGAAATAGTTGAGCTTTTCAAGAAACGTTTCTTGGTACTCTTTCTATCTTCTCTCTATCCCTCATTTTTTTCCCCGTTCCTTCGTAAGAGAAAAACACTCAAACCCTCGTTTCTCTTCTCAACCTCATTTTTTCTCTCCCTCTTCTTCATCTCTTCCATCTTCTCATCTCTTCTTCTTACAATTACACACTATTATCAAACTCACCTTCATTATTTTGCTTCTTTTTCTTTTTTACTCTATCTTTATTTATTAAAAAAAATTCATTTTCTCAAAGTCCCCCAAATAATGAAATTTCAACTTAATGATAAAAAGATATGGGCAGTAGAATTGCAGATTTTCTTGAAGTATGTTGTTGTCCTTACTGAGGATTCTTATGGATTTGCATTGAGGCCTCAATACGCACAAAGATACAGAGAGTATTCTTCAATCTACAAGGAGGAGGAAGGTGAAAGATCATATAAATGGAGAAGCTTCCTTGGAGAGGCACCCAACTCAGCAAAACCAAGTTCTCCTGAGAACAAACACAAAGAAACATCGGAAGTTGAATGTAATGAGGTAAAAGAAGAGAGTAGTTCAAATAAGGTATGCAAAGAAGATGATTTAAATAGTAAGAATATTTCTGAAGGCACTAAAGAGGTTGGTGTAGGGGGTGTTAGTGAAGGAGGTGACTTAAGTGGCAGGAAGTCTTCTGGAGTTAATGAGATAAAAGAAGGCACTAGTGCAGGAAGGGTTTGTGAAGGGGGTGATTCAAGTGGCAGAAAGGTTGTTTTTGATATATCAATAGAAAACAGTTCAGAAAAGGATTTGCACTATTCAGAAGAAAGAAAGACACGTAAAGTTCAACGCTGGGCTGAAATTAGGCCATCTCTTAGTGCCATTGAAAAATTGATGAGTTCTCGTTTCAAAAAGGGAAATGATGTGAAAGGTGAGATAAGAAATGGTAATAATGACCATCTTCCATATATAGAAAAATCTAAACTTGGAGGAGGGGTTTCTGCAACGGATGTTAATAAGTCAAGCGCTGCGTTAGTGGTTGAAGATTCACTTCAACAATTCTCTCTATGGAAAGAACTGGAGTTTCTTGTTCAAGGAGGCATCCCAAAGGATCTTAGAGGAGAGGTTTGGCAAGCCTTTGTAGGTGTAAAGACAAGGCGGGTTAAGAGCTATTATGAGGATCTGTTAGCAAAAGAAACTATCAATGCTGAAAGCAATGAGCAAAATGACACATCTACTGCATCTGGGAAGTGGAGAAAGCAGATTGAGAAGGACATTACAAGAACTTTCCCAGGACACCCTGCTTTGGATGAACATGGTAGAAATTCCTTGAGGCGTTTACTGCTAGCATATGCTAGACATAACCCCTCTGTTGGGTATTGTCAGGCAATGAACTTCTTTGCAGGTTTATTGCTGCTTCTTATGCCCGAAGAAAATGCCTTTTGGACTTTTGTTGGCATCATTGATGATTATTTTGGAGGTTGTTATACAGAGGAAATGATAGAATCTCAGGTGGACCAGCTTGTCTTTGAAGAATTAATGCGTGAAAGATTTCCCAAACTGGTTAATCATCTGGAATACTTGGGAGTGCAAGTGACATGGATATCTGGACCTTGGTTCCTATCAATATTTGTGAACATGATTCCTTGGGAAAGCGTACTTCGAGTTTGGGATGTGCTTCTATTTGAAGGGAACCGTGTTATGCTATTTCGAACTGCACTGGCCCTTATGGAACTATATGGTCCTGCATTAGTCACTACAAAGGATGCAGGTGATGCGATTACTCTATTGCAATCACTTGCTGGTTCAACATTTGACAGCAGTCAACTTGTCTTAACAGCTTGCATGGGTTTTCTAGCTGTGACAGAGGAAAAATTACATGAACTAAGAGAAAAGCATAGACCATCTGTCTTAGAAGTAGTAGAAGAAAGGGCAAGGAAAGGAAGACTTTGGAAGGATTCCAAAGGGATTGCTTCTAAACTGTATAGTTTCAAGCATGACCAAGAACCGTTAGTAGAAGAAAAAAAGGTCAATAAAGGAGATGATATGGCCGCTAATGAGGAAATACCACGGATAGAGTCTCATTCCTCTGATTTGGATGAACTACTTCACAGTCTTAATGTTGATTCTGAAGTGGATTCTCTACCGGATCTCCAGGAACAGGTGGTTTGGTTGAAGGTTGAGTTATGCCGATTGCTGGAGGAGAAAAGAAATGCAATACTGAGAGCTGAGGAGCTTGAAACAGCTTTAATGGATATGGTAAAGCAGGATAATCGACTGCAATTGAGTGCAAGGATTGAGGAATTGGAGCAGGAAGTAGCCGAGTTACAACAAGTCCTTGCAGATAAGAAAGAACAGGAAGTTGCCATGATGCAGGTCTTAGTGAAGCTAGAGCATGATCAGAAAGATACTGAAGATGCTCGTAAAAGAGCAGAACAAGAACTTGCAGCTCAAAAATTAGAAGTTCATATCCTTCAGGAAAAGTATGAGAAAGCCATGATATCAATTGCTGAGTTGCAAAAACGGGTGATTGTTGCAGAAAGTATGTTGGAGGCTACCCTTCAATATGAATCTGGCCAAAACAAAGCACTTTCTTCACCAAGGGTTGGTGGTCGTCAAAGTCCACATACAGATAGCAACTCACGTTTTGGTCTACTTTTTGGACGTGGTTGGCTTGATAAAAACAAGGGGAAGTCTAATGCTGAGGAATCCGGTGAAAATTTGTCTTCCAATGCCGCTTTGGGGACTGAATCCAATGACCAAGAAAAGCAAACATAG 3441 0.4031 MATAALKEILPPSLTSVSDQPPLFDGTTRLYTSYTCPFAQRVWITRNYKGLQEKIKLVAIDLGDRPAWYKEKVYPENKVPSLEHNGKVIGESLDLIKYVDANFEGPSLVPSDPAKKEFGEKLVSEVDSVTRELFSALKGDAIQQTSFVFDSLENALGKFDDGPFFLGQFSWVDIAYIPFIERFQVVLAEVFKHDITEGRPKLRAWIEEVNKIDAYAQTRTDPKEIVELFKKRFLVLFLSSLYPSFFSPFLRKRKTLKPSFLFSTSFFLSLFFISSIFSSLLLTITHYYQTHLHYFASFSFLLYLYLLKKIHFLKVPQIMKFQLNDKKIWAVELQIFLKYVVVLTEDSYGFALRPQYAQRYREYSSIYKEEEGERSYKWRSFLGEAPNSAKPSSPENKHKETSEVECNEVKEESSSNKVCKEDDLNSKNISEGTKEVGVGGVSEGGDLSGRKSSGVNEIKEGTSAGRVCEGGDSSGRKVVFDISIENSSEKDLHYSEERKTRKVQRWAEIRPSLSAIEKLMSSRFKKGNDVKGEIRNGNNDHLPYIEKSKLGGGVSATDVNKSSAALVVEDSLQQFSLWKELEFLVQGGIPKDLRGEVWQAFVGVKTRRVKSYYEDLLAKETINAESNEQNDTSTASGKWRKQIEKDITRTFPGHPALDEHGRNSLRRLLLAYARHNPSVGYCQAMNFFAGLLLLLMPEENAFWTFVGIIDDYFGGCYTEEMIESQVDQLVFEELMRERFPKLVNHLEYLGVQVTWISGPWFLSIFVNMIPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAITLLQSLAGSTFDSSQLVLTACMGFLAVTEEKLHELREKHRPSVLEVVEERARKGRLWKDSKGIASKLYSFKHDQEPLVEEKKVNKGDDMAANEEIPRIESHSSDLDELLHSLNVDSEVDSLPDLQEQVVWLKVELCRLLEEKRNAILRAEELETALMDMVKQDNRLQLSARIEELEQEVAELQQVLADKKEQEVAMMQVLVKLEHDQKDTEDARKRAEQELAAQKLEVHILQEKYEKAMISIAELQKRVIVAESMLEATLQYESGQNKALSSPRVGGRQSPHTDSNSRFGLLFGRGWLDKNKGKSNAEESGENLSSNAALGTESNDQEKQT 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01351 1146 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 332 1084 - -
Aip02g01351 1146 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 598 710 - -
Aip02g01351 1146 SFLD Main (cytGST) 29 210 - -
Aip02g01351 1146 Coils Coil 1015 1063 - -
Aip02g01351 1146 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 722 837 IPR035969 -
Aip02g01351 1146 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 332 1084 - -
Aip02g01351 1146 MobiDBLite consensus disorder prediction 385 456 - -
Aip02g01351 1146 SMART tbc_4 585 809 IPR000195 -
Aip02g01351 1146 MobiDBLite consensus disorder prediction 393 429 - -
Aip02g01351 1146 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Aip02g01351 1146 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Aip02g01351 1146 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 578 745 IPR035969 -
Aip02g01351 1146 Gene3D - 713 856 - -
Aip02g01351 1146 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Aip02g01351 1146 Pfam Rab-GTPase-TBC domain 592 803 IPR000195 -
Aip02g01351 1146 MobiDBLite consensus disorder prediction 1081 1146 - -
Aip02g01351 1146 Gene3D - 105 237 - -
Aip02g01351 1146 MobiDBLite consensus disorder prediction 1081 1102 - -
Aip02g01351 1146 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Aip02g01351 1146 MobiDBLite consensus disorder prediction 1123 1146 - -
Aip02g01351 1146 Coils Coil 980 1010 - -
Aip02g01351 1146 CDD GST_C_Lambda 112 230 - -
Aip02g01351 1146 ProSiteProfiles TBC/rab GAP domain profile. 588 785 IPR000195 -
Aip02g01351 1146 SUPERFAMILY Thioredoxin-like 22 108 IPR036249 -
Aip02g01351 1146 Gene3D Glutaredoxin 1 104 - -
Aip02g01351 1146 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01351 Aip-Chr2 33881994 33912433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01351 11 234 Glutathione S-transferase Gene Family AT5G02790 72.321 5.62e-112 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01351 - - mtr:MTR_1g067150 1102.43