Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01350 ATGGGTTGGATTCCATGTTCTGGAAATTCAAATGCTAAGAAGAAGGTGAAGAAGAAGATGGAAGTGGAGGAAAGTGTGAAGCCTGATCCAATCAAAGGGAAATTGAAGAGGAACTCGTCCATTAATTCGGCAGATTCATCTAAAAATGGGAATACTGATCACATTGCTGCACAGACATTCTCCTTCCGTGAGTTGGCAACTGCAACTCGACATTTTCGGGCAGAATGTCTTTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAGGGCCGTTTGGAAAGTATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGCCTGCAAGGGAATAGAGAGTTCCTAGTTGAAGTGTTGATGTTAAGTCTTCTTCATCACCCGAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGACTTCTCGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTGCTCCTGGCAAGGAACGACTAGATTGGAACACACGAATGAAAATAGCTGCCGGAGCAGCAAGCGGATTGGAATATCTTCATGACAAAGCTAACCCTCCTGTTATATACCGAGATTTAAAGTGCTCCAATATTTTGCTCAGTGAAGGGTATCATCCCAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTACGGATATTGTGCTCCCGAGTATGCAATGACAGGTCAGCTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATCATTACGGGAAGGAAGGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAGGATCGAAGAAAATTTGCGCAAATGGCCGATCCAACGCTTCAAGGTCAATATCCTCCAAGAGGACTCTACCAGGCCCTTGCTGTGGCGGCAATGTGTGTTCAGGAGCAGGCCAACATGCGTCCAGTTATAGCCGATGTTGTTACAGCTTTGAGTTACCTTGCTTCCCAAAGATATGACCCGAATACACAAACAGCACAAAATTCTCGCTTCGCTCCTGGCACTCCTCCTAGAACCAAGAGGGGACACTGA 1137 0.4415 MGWIPCSGNSNAKKKVKKKMEVEESVKPDPIKGKLKRNSSINSADSSKNGNTDHIAAQTFSFRELATATRHFRAECLLGEGGFGRVYKGRLESINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDVAPGKERLDWNTRMKIAAGAASGLEYLHDKANPPVIYRDLKCSNILLSEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFAQMADPTLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPNTQTAQNSRFAPGTPPRTKRGH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01350 378 MobiDBLite consensus disorder prediction 36 52 - -
Aip02g01350 378 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 376 - -
Aip02g01350 378 MobiDBLite consensus disorder prediction 1 52 - -
Aip02g01350 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Aip02g01350 378 SMART serkin_6 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01350 378 MobiDBLite consensus disorder prediction 357 378 - -
Aip02g01350 378 CDD STKc_IRAK 78 346 - -
Aip02g01350 378 PANTHER OS07G0668900 PROTEIN 1 376 - -
Aip02g01350 378 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01350 378 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Aip02g01350 378 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Aip02g01350 378 Gene3D Transferase(Phosphotransferase) domain 1 149 368 - -
Aip02g01350 378 Pfam Protein tyrosine and serine/threonine kinase 76 345 IPR001245 GO:0004672|GO:0006468
Aip02g01350 378 MobiDBLite consensus disorder prediction 14 34 - -
Aip02g01350 378 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01350 Aip-Chr2 33815716 33819936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01350 52 351 Glycoside Hydrolase AT3G07070 72.000 4.46e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aip02g01350 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01350 - - gmx:100776041 682.945