Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01334 ATGTCCATCATTCATGATCCATCTCTGACAATGATACAAGACCCTGAATTAGTAGAGGAAGGTGAAGAGGATGATGAAATTAAGGATCTTTTCAAGGTAGAAGTTGGATCTTCTAACAGAAGTCCTCTCGAAGAAATAGCTCTAACATTTTTGGACCATGGAGTACTAACTTTGTTAAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATTAACATACGCACAGCAATTTTGACTATTTTAAATTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGGAAGGTGATCATGTTCCTATCGAAGTCCGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGAAACTGGTTGACAAATGGAGCCGACCCATATTTAATAAGAGTACACGGTTTAAGGACATGAGAAATGCTGAGGACGATAGGATTCCTTTCAGGAGGCCAACTGTTAATAAGTGCTCAACCATTCTGATTTAA 510 0.3843 MSIIHDPSLTMIQDPELVEEGEEDDEIKDLFKVEVGSSNRSPLEEIALTFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILTILNFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKKLVDKWSRPIFNKSTRFKDMRNAEDDRIPFRRPTVNKCSTILI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01334 169 Pfam TFIIS helical bundle-like domain 90 136 IPR017923 -
Aip02g01334 169 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 27 142 IPR035441 -
Aip02g01334 169 PANTHER PROTEIN IWS1 HOMOLOG 1 48 164 IPR044204 GO:0009742|GO:0032784
Aip02g01334 169 ProSiteProfiles TFIIS N-terminal domain profile. 57 139 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01334 Aip-Chr2 31432571 31435027 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip02g01334 Med26 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01334 K17498 - gmx:100801805 221.476