Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01320 ATGGAATCCATAAGCTCGAATGATGAGGTTGTTCCAAGCATAGGAATGACATTCCCCTCTGTGAAAGATTATGAAACTTTTTATACCAATTATGCAAAGAGGGTTGGTTTTTCATGGAATATAAGAACTACTAAGTGGAATCAAAATAGACAGATTACATATCAAATCTTAGTATGTTCTAAAGCTGGTTATCAAAGATCAAAAATTGATCCACTAAAGAAGACAAATCTAACTTCCGAGCAAAATTGTAAAGTTAGGATTATTGTGAAAAAGGACAAGAAGCTGGAATATGTGTTAACCTTTGTGAATAACCAGCACAATCATGTTATTAGTCCTAGCATGGCAAACACTCTGAGAAAGAATAGGGAACTAAGCTTGCATGCCAAATGGATAGCTGAGATCAATGATCAAGCTGGTGTTACAATGAGAAACAGATATCAGAGTTTAGCAACTACTGCTGGTGGCTATGATAAATTGACTTTTAATGAGAAAGATCTTCGGAATCATGTAGCAAAAAGTGTTAGAGTCATACAAGATGAGGGGGATGCGCAATCATTAATGCAGTATTTTCATAGGATGCAACAACAAAACCGCAACTTCTTTATGAAGTTAAATTGGACGAGCAACATCTCATAG 636 0.3553 MESISSNDEVVPSIGMTFPSVKDYETFYTNYAKRVGFSWNIRTTKWNQNRQITYQILVCSKAGYQRSKIDPLKKTNLTSEQNCKVRIIVKKDKKLEYVLTFVNNQHNHVISPSMANTLRKNRELSLHAKWIAEINDQAGVTMRNRYQSLATTAGGYDKLTFNEKDLRNHVAKSVRVIQDEGDAQSLMQYFHRMQQQNRNFFMKLNWTSNIS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01320 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 204 IPR031052 GO:0006355
Aip02g01320 211 Pfam FAR1 DNA-binding domain 26 111 IPR004330 -
Aip02g01320 211 PANTHER OS03G0843700 PROTEIN 6 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01320 Aip-Chr2 30690722 30691884 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01320 FAR1 3.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01320 - - aip:107627133 352.829