Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01302 ATGCCCAGCTGGAGCACCAAGGATTTGTTAGTGGTTCTTGCTTTGGCAGTTACGGCCTCGAGCTTATTGAATGGGGTGAAGTGCCAGCAAATGAGTGACCTTGACAACCCTGCTGTTCTCTCTGTTTTGACACAGCTTGTTTACAGCCAAGTCTCCAACGTCACCTCTTTCCTCAGTCACGAAATTAGCAACCGCTCCAGTTTCTGCGTCGAAGATCTGAATGCTGATTGGAATAATGCATTTAACTTTTCATCTGACTTGGGCTTCTTGACTTCTTGCATTCAAAAGACGAAAGGGGACATAAAGCAACGCATATGTAATGAAGCCGAAATAAAGTTTTACTCAAATAGTTTATTGGATAGATCTAATGGTATTAACTATTTGAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTATCTGGTTGTGAGCCAGGATGGGCCTGTAGTGCTCCCTCGACCGAGCAGGCTGAACTCCAAAATTCACAGGATATGCCTTCAAGAACTACTGACTGTGAACCATGTTGTGAAGGTTTCTTTTGCCCTCATGGTATCACATGCATGATACCTTGCCCTCTTGGATCCTATTGTCCTCTTGCAAAACTCAATAACACAACTGGTGTATGTGAACCATATCGTTATCAATTGCCTCCAATGCGGCCAAACCATACCTGTGGAGGTGCAAATATTTGGGCTGATGTTGATAGCGGTAGTGAGACATTCTGTCCAGCAGGATGGTATTGCCCAACAACTACAAAACGTATTCCTTGCAGTAGTGGGCATTACTGTAGGATGGGTTCTATATCTCAGACAAGATGCTTCAAGTTGACTTCATGTAAATCGAAAGCTGAGACCCAAAACATGGGTGTGTACGGAATTATGCTCATTGCTGCTTTGAGTACATTGCTGATTATCATTTACAGCTGTTCTGATCAAGTTCTCAGTACTAGGGAAAGGAGAATGGCGAAGTCCAGAGAAGCAGCAGCTAGATCTGTAAGGAAGACTTCAAATGCACGACAAAGATGGAAAACTGCAAAAGATGTTGCTAAAAAGAGTGCAAGTGGACTACAAGCTCAACTATCACGAACATTTTCGCGTAAGAAGGACGTAGCAGATCCAGAAAAAGTTAAAATATTGGGTCAAGCAACTTCAGAAACTGATATAGAATTGCTTTCACATTCACACCCTATTACTCCAAACATTGCTTCCAGCTCATCAGCTGTTCAAAAAGAAAAGGCTAAAGAATCCATTGATACGATGCAGATGATGCATGAAATTGAAAATGACGATAACCTTCACTTAGAAACTAAAACTAGAGATAAAAGTGTCCAAGGCAAAGCTTCTAAGGAAAAGCAACCTGAAACTCATAGCCAGATTTTTAAGTATGCATATGCTCAATTGGAGAAGGAGAAGGCACAGCAACAAGAAAACAAGAATCTTACTTTCTCAGGAGTAGTTAACATGGCTACCAAAGGTGAACCAAGGAAACGGCTGTTAATGGAAATTTCTTTCAAAGATCTAACTCTCATTTTGAAGGTGCAAAACAAACTTATATTGAGATGTGTAACGGGGAAAATTAAACCTGGGCGCATTACTGCTGTCATGGGTCCATCAGGGGCCGGTAAGACAACATTTCTTTCAGCAGTAGCTGGAAAAGCATTTGGATGCAAGATGACTGGTTCAGTTCTTATAAATGGAAAGACTGAATCAATCCACTCCTATAAGAAAATTATTGGTTTTGTGCCACAAGATGACATAGTTCATGGAAATCTGACAGTAGAAGAGAATTTATGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGCCGAAAGCAGACAAAGTTCTGGTTGTAGAAAGAGTTATTGAATTCTTGGGCCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAACGAGGGATTTCCGGTGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTTTATTGTTAGATGAACCCACATCTGGTTTGGACAGTGCATCATGTCAGCTACTTCTTAGAGCATTAAGACGGGAAGCTCTTCAAGGAGTGAACATATGCATGGTGGTTCACCAACCAAGCTATGCATTGTTCAATATGTTTGATGAGTTGATACTTCTGGCGAAAGGAGGTCTTACTGTGTATCATGGACCTGTCAAGAAAGTTGAAGAATACTTTCTAGGACTTGGGATCTGTATTCCGGAGCGGATCAATCCTCCTGATTACTTTATCGACATTTTGGAGGGCATAGTAGAACCTGGTGGAAGCTCGGGAGTCAGTTATAAAGACCTGCCAGTTAGATGGATGCTTCATAAGGGATACCCAGTACCTCTTGATATGCAGAAGAATGCAGTGAAATTTGGTAACTTAACTCCAAATCCAGCTAAAGAAACTGATCCCAATGGCTCTGGACATGACGAAAGAAGCTTTGCCGGAGAACTATTGCATGATGTTAGACACGTCGTTGAATTGGAGGGGGAGAAGATACTATTCAACTTTTTGAAATCCCAGGATTTATCTAACCGGAAAACTCCTGGGATATTCAAGCAATACAAGTACTTCCTTATACGGATTGTGAAGCAGCGACTAAGGGAGTCTAAAATCCAAGCTATAGATTATCTAATATTATTACTTGCTGGAGCTTGCTTAGGAGCGCTGAGTAGAGGAAATGATCAGAAGTTTGGTGGAGATGGATACATCTATACAGTGATTTGTGTATCTCTTTTATGTAAAATTTCGGCCTTGAGATCATTTTCTCTGGATAAATTGCACTACTGGAGGGAGAGGGATTCTGGGATGAGCAGCTTGGCTTACTTTCTTTCTAGAGATACAATGGATCATTTTAATACTCTGGTTAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTCACCTATCCAAGATCAACTTTTGCGGATAATTACATTGTGCTGCTCTGTCTAGTATACTGTGTGACTGGAATAGCATATACATTGGCAATAGTATTCAAACCTGGCGCGGCACAGCTATGGTCAGTGCTTCTTCCAGTTGTTTTAACCCTTGTTGCAACACAAGCTAAAGACAGTAAATTTTTGAAGGTTCTAGCAAATTTATGCTACCCTAAGTGGGCTTTAGAAGCATTCGTAATCGCAAATGCTGAAAGGTACCATGGAGTGTGGATCATAAGTCGTTGTGGTTCACTAAAGAGAAGTGACTATAATATTCATGATTGGAGTTTGTGTGTTTCCATCCTAATTCTTATGGGTGTAACCGCTCGGGCAATAGCTTTATTCTCTATGCTTACCTTTCAAAAGAAGTGA 3327 0.4118 MPSWSTKDLLVVLALAVTASSLLNGVKCQQMSDLDNPAVLSVLTQLVYSQVSNVTSFLSHEISNRSSFCVEDLNADWNNAFNFSSDLGFLTSCIQKTKGDIKQRICNEAEIKFYSNSLLDRSNGINYLKPNKNCNLTSWVSGCEPGWACSAPSTEQAELQNSQDMPSRTTDCEPCCEGFFCPHGITCMIPCPLGSYCPLAKLNNTTGVCEPYRYQLPPMRPNHTCGGANIWADVDSGSETFCPAGWYCPTTTKRIPCSSGHYCRMGSISQTRCFKLTSCKSKAETQNMGVYGIMLIAALSTLLIIIYSCSDQVLSTRERRMAKSREAAARSVRKTSNARQRWKTAKDVAKKSASGLQAQLSRTFSRKKDVADPEKVKILGQATSETDIELLSHSHPITPNIASSSSAVQKEKAKESIDTMQMMHEIENDDNLHLETKTRDKSVQGKASKEKQPETHSQIFKYAYAQLEKEKAQQQENKNLTFSGVVNMATKGEPRKRLLMEISFKDLTLILKVQNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAVAGKAFGCKMTGSVLINGKTESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSADLPKADKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLLLDEPTSGLDSASCQLLLRALRREALQGVNICMVVHQPSYALFNMFDELILLAKGGLTVYHGPVKKVEEYFLGLGICIPERINPPDYFIDILEGIVEPGGSSGVSYKDLPVRWMLHKGYPVPLDMQKNAVKFGNLTPNPAKETDPNGSGHDERSFAGELLHDVRHVVELEGEKILFNFLKSQDLSNRKTPGIFKQYKYFLIRIVKQRLRESKIQAIDYLILLLAGACLGALSRGNDQKFGGDGYIYTVICVSLLCKISALRSFSLDKLHYWRERDSGMSSLAYFLSRDTMDHFNTLVKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYTLAIVFKPGAAQLWSVLLPVVLTLVATQAKDSKFLKVLANLCYPKWALEAFVIANAERYHGVWIISRCGSLKRSDYNIHDWSLCVSILILMGVTARAIALFSMLTFQKK 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01302 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 733 IPR027417 -
Aip02g01302 1108 SMART AAA_5 528 720 IPR003593 -
Aip02g01302 1108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 33 1105 - -
Aip02g01302 1108 Gene3D - 500 735 IPR027417 -
Aip02g01302 1108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1105 - -
Aip02g01302 1108 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524
Aip02g01302 1108 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 743 IPR003439 GO:0005524
Aip02g01302 1108 MobiDBLite consensus disorder prediction 432 455 - -
Aip02g01302 1108 Pfam ABC transporter 521 671 IPR003439 GO:0005524
Aip02g01302 1108 Pfam ABC-2 type transporter 700 1108 IPR043926 GO:0140359
Aip02g01302 1108 MobiDBLite consensus disorder prediction 325 354 - -
Aip02g01302 1108 CDD ABCG_EPDR 500 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01302 Aip-Chr2 29446039 29456695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01302 526 732 Calmodulin-binding Proteins AT2G36910 28.319 2.34e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01302 - - gmx:100783798 1710.66