Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01292 ATGCTGAAATCACATATTGCATTTATACTGAAGATAAGACTTGAGCATATCCCTGAGAGGATTGTGTTGATATCTGAGGCTGCGAATAGAGAGAAACCTTCTGCCGTGAGTGACAATGAAGATTGTAACATCAGCAGCATATTTGAAGAAGCTTGTGATTTTATAGATTATGTTGAGCAGATTGGTCAGATAGTTTCAGTTCATTGTTTTGAAGGGAGAAGCAGAAGTGTTACTCTGGTTCTTGCTTACTTAATGCTTAGAAAATTAGTTCATTTTTTATGGGATGGTTTGGTGTTGTATTCAAATCCGACATATCTCAAGTTTCAGAACATCTATCTATAG 342 0.3596 MLKSHIAFILKIRLEHIPERIVLISEAANREKPSAVSDNEDCNISSIFEEACDFIDYVEQIGQIVSVHCFEGRSRSVTLVLAYLMLRKLVHFLWDGLVLYSNPTYLKFQNIYL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01292 113 Gene3D Protein tyrosine phosphatase superfamily 13 97 IPR029021 -
Aip02g01292 113 CDD DSP 36 88 - -
Aip02g01292 113 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 36 87 IPR029021 -
Aip02g01292 113 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 36 89 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aip02g01292 113 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 7 39 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aip02g01292 113 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 49 85 IPR000387 GO:0016311|GO:0016791
Aip02g01292 113 Pfam Dual specificity phosphatase, catalytic domain 30 88 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01292 Aip-Chr2 29053824 29054887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01292 7 97 Protein tyrosine phosphatase (PTP) family AT5G23720 40.000 1.54e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01292 K14165 K17614 ahf:112770730 122.479