Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01288 ATGTCTTTCCCCAATCAAGCATTTTGGATGGCAAAGGATCCTGGAAGTTTGAATGATGGTGACATGACATGTGACGAATCTTCTAGAATTGAGTCCAAGAGATCTCATCAATGGTTCATGGATGGTCCTGAAGTGGATGTATTTCCCAATAAGAAACAGGCAGTAGTGCCCCCAAACAATTTACTGTCAGGAATGCTTAACTCCAATCTTTCTTCATGGGGAAATTCCTCAAGTTTCCAATCCTTAACCGATGATTTCACTGCACAATTGTTTGACCCAGATACAGCTACTACCAATCATGGGGATGCAAATATTTCATCTCTTAGCATGGACAATAAGTCAGGTGGTGAGAGAAAGGATAGCATGAATCCCTTCGGGAGTGGTTCATCATTTGGTTTATCTATGTCCTGTACATTGGATGATCCTCGTTTAGCTTTCAATTATGATGGAATTAGAAAAATTAAAGTTAATGAAGTGAAGGAATCTCATAGTGTCATGTCTGTCCCTGAAAATAATCCCTATGAAAAGGGAGTCAGCAGCACCGTGTTAAATTCTCAAGCATACAGCGCTGATGATAATTCCATATCAACGAATCTTGCTTATACCAAAGGGGATGCTAATATAATATCAATGGATGACCCGTACAGCAGGACAGATAACAATTTAATGTCAGTGGTTCAATCTCATAACAAGGGAGGGGATGGCTTATCTATCCATCAAACTTACAAAGATATTTGTAATACAATATCAATGGACCAAGGATTTAGCAAGGTGGATAGCAGCATGACATCTGTTGCTCAAGCTTATAAGGCCGATGACAATTCTATGTTAAGAGATTACTTATTCGACAAGGTTGAAAATGGCACCATATCAGCGGGTCACCCATATGGCATGGGAGGAAACAACATGCCATTTGTTTCACATTCTTATAATAGTGGGGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGATCCAACTCACTCTGGCCTATTCATTTCCAACTATGACATGTTGACGGGTCAAGCACTTCCACAGAAGTTGGAAGCTGTGAATGAGAAAGAGTTTGTCAGATCTAATTCTAATTTACTTCTAAATACAGCTCAGACATCTGCATCTGAAACTGAAAGTGTTTCCAAGACAAAAGAAGAGATAAAAATGTCTAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGCATGCTTGATGGTGTCTCTGTAAAGTATAAGGCATGGTCGCGGGAGAAGGAGCTTCGAGGAGTTATAAACGGTGCTGGGTATTTATGCAGTTGCCAGTCTTGTAATTTTTCCAAGGTTATTAACGCATATGAGTTTGAACGACATGCTGGTTGCAAGACAAAACACCCCAATAATCATATTTACTTTGAGAGTGGGAAAACTATATATGGTGTTGTACAAGAGCTCCGGAGCACTCCACAGAATATGTTATTTGATGTTCTTCAGACAGTAACTGGTTCAGCAATCAATCAGAAGTCCTTCCGCATTTGGAAAGAATCCTTTTTGGCTGCGGCTCGGGAACTCCAGCGCATTTGTGGAAAAGGTGAAGTGAAGTAG 1602 0.402 MSFPNQAFWMAKDPGSLNDGDMTCDESSRIESKRSHQWFMDGPEVDVFPNKKQAVVPPNNLLSGMLNSNLSSWGNSSSFQSLTDDFTAQLFDPDTATTNHGDANISSLSMDNKSGGERKDSMNPFGSGSSFGLSMSCTLDDPRLAFNYDGIRKIKVNEVKESHSVMSVPENNPYEKGVSSTVLNSQAYSADDNSISTNLAYTKGDANIISMDDPYSRTDNNLMSVVQSHNKGGDGLSIHQTYKDICNTISMDQGFSKVDSSMTSVAQAYKADDNSMLRDYLFDKVENGTISAGHPYGMGGNNMPFVSHSYNSGESTIISFGGCDDDDPTHSGLFISNYDMLTGQALPQKLEAVNEKEFVRSNSNLLLNTAQTSASETESVSKTKEEIKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVINGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFESGKTIYGVVQELRSTPQNMLFDVLQTVTGSAINQKSFRIWKESFLAAARELQRICGKGEVK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01288 533 Pfam Tify domain binding domain 429 484 IPR032308 -
Aip02g01288 533 MobiDBLite consensus disorder prediction 97 112 - -
Aip02g01288 533 PANTHER AUTOIMMUNE REGULATOR 5 532 - -
Aip02g01288 533 MobiDBLite consensus disorder prediction 97 126 - -
Aip02g01288 533 PANTHER PROTEIN, PUTATIVE-RELATED 5 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01288 Aip-Chr2 28578506 28581332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01288 387 516 PHD Transcription Factor Family AT3G53680 56.923 8.07e-45 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01288 - - mtr:MTR_1g067750 669.848