LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g01287	ATGGAGAGTAGCAGTAATTGGTACGAAAGGTCAAAGCCATTCATAGCTGTTACTTTTCTTCAGTTTGGATTTGCAGGCATGGATGTTCTATCCAAAGCTGCTATGAACAAAGGGATGAGCAACTACGTCCTCGTCGTCTATCGCCACCTCGTTGCCTTCTTCGCCATAGCTCCTTTTGCTCTTTTCCTTGACAAGAAAGTGAGGCCTAAAATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGCATCCTAGAGCCAGTTATTGATCAGAACTTGTATTTTTTGGGGATGAAGTACACAACAGCAACTTTTGCTGCTGCCATGACCAACATGCTTCCTGCCATTACCTTCTTCATGGCTTGCATTCTTAGACTAGAGAAGATTAAAATAAAAAGTATTCGTAGCATAGCAAAGGTGGTTGGAACTCTAGCGACCGTTTCTGGTGCCATGGTGATGACACTGTTGAAAGGGCCAATTATTGAGCTTTTTGGAAGACATGGAGGCAGTAACCACAATCTTCATCACGATGCTGATGAAAATACTCAACATGCAATAAAAGGATTTATTATGATCACAATAGGCTGTTTTAGTTGGGCCTGTTTCGTGATCCTCCAAACTATAACCCTTGAAGCCTACCCTGCTGAGCTCTCTCTTACGGCATGGATATGCATTTTGGGAGCAGCTGAAGGTGCTGCAGTTGCTATGATTATGGAAAGAGCCAACCCTTCTGTTTGGTATCTGAAATGGGATATGAAATTGCTTGCTGTTGTCTACAGTGGCATAGTGTGTTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACAAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATTATGGGCTCCCTCATTCTAGCAGAGAAACTATTTCTTGGCAGGTTGATTGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGCTAAACAAGTTACAGAGGAAGCCAACACCAAAAAGGAACATTGTAATCACCACCACATTGCCATCAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA	1140	0.4246	MESSSNWYERSKPFIAVTFLQFGFAGMDVLSKAAMNKGMSNYVLVVYRHLVAFFAIAPFALFLDKKVRPKMTFSIFMKIVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFFMACILRLEKIKIKSIRSIAKVVGTLATVSGAMVMTLLKGPIIELFGRHGGSNHNLHHDADENTQHAIKGFIMITIGCFSWACFVILQTITLEAYPAELSLTAWICILGAAEGAAVAMIMERANPSVWYLKWDMKLLAVVYSGIVCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEKLFLGRLIGAIVIVLGLYLVVWGKSKDYKPPSNEPVLPAKQVTEEANTKKEHCNHHHIAISNLRAGITTLEEQA	379

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aip02g01287	379	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	143	-	-
Aip02g01287	379	Pfam	EamA-like transporter family	22	141	IPR000620	GO:0016020\|GO:0016021
Aip02g01287	379	Pfam	EamA-like transporter family	187	326	IPR000620	GO:0016020\|GO:0016021
Aip02g01287	379	PANTHER	WAT1-RELATED PROTEIN	9	338	-	-
Aip02g01287	379	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	232	331	-	-
Aip02g01287	379	PANTHER	WAT1-RELATED PROTEIN	9	338	IPR030184	GO:0016021\|GO:0022857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g01287	Aip-Chr2	28574042	28578074	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g01287	9	367	Nodulin-like Gene Family	AT2G37460	61.538	3.11e-164	463

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g01287	-		-	ahf:112727266	723.391

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip06g01548	06	27583737	27587259	Aip02g01287	02	28574042	28578074	PCT

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