Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01253 ATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTACAAGACTTATGCAATGATGCACAGTTTCGCTGTGAGGTTGGATGAAGTCAGACGTGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTACAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTTGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTAAAAAAAGGAAGGAAAATGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTATCTGAGAGGTAAAGCTGGGAACGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTGATGGGACTAGCCGCATTGATTATGAGTGCTTTGGGGATGTATTGACATTTGATTCGACTTAA 633 0.4344 MQLQFTDEEAVYRFYKTYAMMHSFAVRLDEVRRDSDGSVIMRQIVYNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLDTKIQQWKVVSFYEEHSHELVAPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAKKRKENVKGGDANAAISYLRGKAGNDSYFFGKYTLSNENRLENLFWADGTSRIDYECFGDVLTFDST 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01253 210 PANTHER OS02G0262500 PROTEIN 146 210 - -
Aip02g01253 210 PANTHER OS02G0262500 PROTEIN 3 140 - -
Aip02g01253 210 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Aip02g01253 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 140 IPR031052 GO:0006355
Aip02g01253 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 146 210 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01253 Aip-Chr2 27152443 27153136 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01253 FAR1 1.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01253 - - aip:110268388 400.979