Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01249 ATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTGCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATATTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCATGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATATTTACCTTGGTGGTGATGCTAGTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTAGTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTTGTTGGTGATTGCATACCTCATGTGGAGGGAAGGACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGCAAGGGGTATTGCCGATCCGAATATGGGGTTTGCTTGCTAG 567 0.3986 MRGNPGERLKLDLCSIQMNNDRNCNNGSNISGNNNSCNNNGVSGLMKRDRIAFFDKECSKVAEHIYLGGDASAKNRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDISSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTLLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFAC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01249 188 Gene3D Protein tyrosine phosphatase superfamily 32 188 IPR029021 -
Aip02g01249 188 CDD DSP 58 186 - -
Aip02g01249 188 Pfam Dual specificity phosphatase, catalytic domain 65 186 IPR000340 GO:0008138|GO:0016311
Aip02g01249 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 186 IPR029021 -
Aip02g01249 188 PANTHER MKPA PROTEIN 4 188 - -
Aip02g01249 188 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 4 188 - -
Aip02g01249 188 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Aip02g01249 188 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 188 IPR020422 GO:0006470|GO:0008138
Aip02g01249 188 SMART dsp_5 57 188 IPR020422 GO:0006470|GO:0008138
Aip02g01249 188 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 177 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01249 Aip-Chr2 27005011 27005577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01249 56 186 Protein tyrosine phosphatase (PTP) family AT3G06110 35.878 1.12e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01249 - - aip:107627084 364.385