Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01248 ATGGGCAGCAGGGAAGAGAGGAAAGAAAAAGATAAGAGCAGAGAAGAAAGGGCACGAACCAGCAGTGTGAATAGGTTTACAGAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAAGTTGCCTTTAGAGCACCTCTTGGACAGAACACGGTCCTTTTTAGAGGCCCAAAGAACTCCAGGAAAGTTGTGAAACACTTTGGTCCTGCTGCTGGTGTTCCTCACAGCCAAACCAAGCCTTATGTATGA 267 0.4682 MGSREERKEKDKSREERARTSSVNRFTETARARIEKAGGECLTFDQVAFRAPLGQNTVLFRGPKNSRKVVKHFGPAAGVPHSQTKPYV 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01248 88 Gene3D - 10 88 - -
Aip02g01248 88 PANTHER 60S RIBOSOMAL PROTEIN L18 23 88 IPR000039 GO:0003735|GO:0005840|GO:0006412
Aip02g01248 88 MobiDBLite consensus disorder prediction 1 25 - -
Aip02g01248 88 Pfam Ribosomal protein 60S L18 and 50S L18e 25 88 IPR021131 -
Aip02g01248 88 MobiDBLite consensus disorder prediction 1 22 - -
Aip02g01248 88 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 23 88 - -
Aip02g01248 88 SUPERFAMILY Ribosomal proteins L15p and L18e 23 61 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01248 Aip-Chr2 26962351 26963725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01248 25 88 Cytoplasmic Ribosomal Protein Gene Family AT5G27850 87.500 4.43e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01248 K02883 - pvy:116119842 121.709