LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g01179	ATGGCTGCTACTGCCAATCCTGTAGTTGGGTCCCAAGTTTGGTTGGAGGATCCAGAGGCAGCTTGGATAGATGGTGAAGTTTTGGAGGTTAAGGGGCAAGACATCAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTGGTTAAAGTGTCCAGCGTTTATCATAAAGATACTGAAGCTCCACCATGTGGAGTGGATGATATGACAAAGCTTGCTTATCTGCATGAACCTGGTGTCCTAGCTAATCTGAGATCTAGATATGATATCAATGAAATATATACGTATACTGGGAATATATTGATTGCTGTGAACCCGTTCATAAAGCTCCCTCATTTATACGATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGCGAGCTAAGTCCACATCCTTTTGCAGTTGCAGATGCAGCATATAGGCTTATGATTAATGAAGGAATCAGTCAGTCAATACTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACAAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGTAGAGCTGCTGTTGGTGAAGGTAGGACTGTAGAGCAGAAAGTCCTAGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGGAAGTTTGTGGAGATCCAATTTGACCAGAGGGGAAGGATTTCTGGAGCTGCTATTAGAACATATCTGTTGGAAAGATCACGTGTTTGCCAATTGTCCGATCCAGAAAGAAATTATCACTGTTTCTATATGCTGTGTGCTGCACCTCCAGAGGATGTTAAGAAGTACAAATTAGGAAACCCAAGAACATTTCATTATCTAAACCAAACAAATTGCTTTGAGTTGGAAGGAGTTGATGAAGCAAAAGAATATCATGATACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTCCGAGTGGTAGCTGCAATTTTGCATCTTGGCAATATTGAATTTACAAAAGGTCAGGAAATTGACTCATCTACGCCCAAAGATGAAAAATCTCGGTTCCATCTACAAACTGCTGCTGAACTTTTCATGTGTGATGCAAAGGCACTTGAGAATTCTCTTTGCAAGCGAGTGATTGTTACGCGTGATGAAACAATTACTAAATGGTTGGATCCAGAATCTGCTGCACTTAGCCGAGATGCTTTGGCTAAGATTGTGTACACGAGATTGTTTGACTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGACCCTGAGTCGAAGTCCTTAATCGGTGTGCTGGATATTTATGGTTTTGAAAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACACTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATATAAAAAAGAGGAGATTGATTGGAGTTACATTGAGTTTGTTGACAATCAAGATGTCCTGGATCTCATCGAAAAGAAACCTGGTGGCATTATTTCTCTTCTTGATGAAGCTTGCATGTTTCCTAGATCAACACACGAAACTTTTGCCCAGAAGTTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCTAAATTGTCACGTAGTGACTTCACAATTTGCCATTATGCTGGTGATGTGACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTACGTTATTGCAGAACACCAAGCACTTCTTTATGCTTCTAAATGCTCCTTTGTATCGAGTTTGTTTCCCCCCTCGTCTGAGGAGTCATCCAAACAATCAAAGTTCTCTTCAATAGGTTCACGATTCAAGCAACAATTGCAAGCTCTACTTGAAACTCTCAGTTCCACCGAGCCACACTATATTCGTTGCGTAAAACCCAACAATCTTCTTAAGCCTGCAATTTTTGAGAACAAAAATGTTCTGCAGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATTAGAATAAGCTGTGCAGGGTACCCCACTAGAAAAACCTTTGATGAATTTGTGGATCGGTTTGGACTTCTTGCACCTGAAGCACTAGATAGAAGCTCTGATGAGGTTTCTGTATGCAAGAGGATTCTGGAAAAAGTTGGACTTAAATGTTATCAGATTGGAAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCTGACTTAGATACTCGTAGAACTGAAATACTAGGAAGATCGGCAAGCATTATTCAGAGGAAAGTTCGTACCTATTTGGCCCGCCGAAGTTTTGTATTGCTTCGTTTGTCTGCTATACAGATTCAAGCTTCATGCAGAGGACAACTTGCTCGACAAGTTTACGAGGGATTGCGGCAGGAGGCTTCTAGTCTGATGATTCAGAGGTATATACGCATGCATGCTGCTAGAAAGGCTTATAGAGAATTGTATAGAGCTGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCTGCTCGTTGTGAGCTGAACTTTAGGAAGCAGACTAGGGCAGCAATTGTCATTCAGAGCCATTGCCGAAAATATTTGGCACAACATCGTTTTAAGGACTTAAAGAAGGCAGCAATTGCTACACAATGTGCATGGAGAGGAAAAGTTGCTCGCCGAGAGTTACGAAAGCTCAAGATGGCTGCCAGAGAAACTGGAGCACTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGATCTTACACTAAGGTTACAGCTGGAAAAACGCATGAGGGCTGACATGGAAGAAGCAAAATCACAAGAAAACGAAAGATTACAGTCTGCTTTGCAAAAGATGCAACTGCAATTTAAAGAGACTAAGGCACTTCTTAAGAAGGAGCGTGAAGAGGCTATGAAAAGAGAGGCAGAGAGAGTACCTGTCATACAGGAGATTCCCGTTGTTGACCATGGTTTGATGGAAAAGTTAACTAGTGAAAATGAGAAACTCAAGAACTTGGTGAGCTCTCTGGAAGAGAAAATTGGTGAAACAGAAAAGAGGTATGAAGAGGCAAGCAAAGTCAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACTGCAATGCAAAGGCTTGAAGAGAAATTCTTAGATATGGAATCGGAAAACCAGGTTCTTCGGCAACAAACTCTGATAACATCATCTGTAAAACCAATGTCAGAGCACCTTTCCAATCATGTTTACGAGAAGTTGGGCAATGGTCATCATGTGGTAGAAGAGCAGAAATCTGCTGAGAGTGTTACACCTACTAAAATGTTTGGTACAGAATCTGATAGCAAATTGAGGAGATCCTACATTGAACGTCAACATGAGAATGTTGATGCTCTTGTAAACTGTGTAATGAAGAATATTGGCTTCCATCATGGAAAGCCTGTTGCTGCATTCACCATTTACAAATGCCTGCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGACCGTCTTATCCAGATGATAGGTTCTGCAATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGTTGTCAAATACGTCTGCATTATTGTTTTTGCTCCAACAAAGTTTGAAGTCCGGAGGTGCAAGTGATACCACCCCAGTTAAAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGCTCGTCCCCTTCTTCAGCCAACCTTCCGGCTCCAGCATTAGAGGTTGTAAAGAAGGTTGAAGCTAAATACCCTGCTTTGCTGTTCAAGCAGCAGCTCACAGCCTATGTAGAAAAAATATATGGTATCCTTCGGGACAACTTGAAAAAGGAGTTGGCATCGTTGCTTTCATTATGTATACAGGCCCCAAGAACATCAAAGGGAGTGTTACGGTCTGGCCGATCCTTTGGCAAAGATTCTCCCATGGGTCACTGGCAAAGTATTATTGAATCCCTCAACACCCTCCTATGTACTTTGAAAGAGAACTTCGTGCCTCCAGTCCTAATCCAAAAGATCTACACCCAAACATTCTCATATATTAATGTTCAACTCTTCAACAGTCTTCTTCTACGTCGGGACTGTTGCACATTCACCAATGGAGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGTGCTCAAGCAAAGGAGGAGTATGCAGGTTCATCTTGGGACGAGCTTAAGCACATCAGACAGGCAGTTGGGTTCTTGGTTATTCATCAGAAGTACAGGATTTCCTATGATGAAATCATTAACGATTTATGCCCTATCATGAGTGTCCAGCAGCTATATAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTTTCTCCGGACGTCCTTTCTAGCATGAGGGTGCTTATGGCCGAGGATTCGAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAATTCCAGTATTCCCTTCTCAGTGGATGACCTTTCTACAGCACTCCAAGAGAAGGAATTCTCAGACATGAAACCAGCAGAAGAGCTTCTTGAGAACCCTGCCTTCCAATTTTTAAATGAGTAG	4539	0.4135	MAATANPVVGSQVWLEDPEAAWIDGEVLEVKGQDIKVLCTSGKTVVVKVSSVYHKDTEAPPCGVDDMTKLAYLHEPGVLANLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAVGEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEDVKKYKLGNPRTFHYLNQTNCFELEGVDEAKEYHDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGQEIDSSTPKDEKSRFHLQTAAELFMCDAKALENSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYTRLFDWLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLYASKCSFVSSLFPPSSEESSKQSKFSSIGSRFKQQLQALLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDRSSDEVSVCKRILEKVGLKCYQIGKTKVFLRAGQMADLDTRRTEILGRSASIIQRKVRTYLARRSFVLLRLSAIQIQASCRGQLARQVYEGLRQEASSLMIQRYIRMHAARKAYRELYRAAVSIQTGMRGMAARCELNFRKQTRAAIVIQSHCRKYLAQHRFKDLKKAAIATQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRADMEEAKSQENERLQSALQKMQLQFKETKALLKKEREEAMKREAERVPVIQEIPVVDHGLMEKLTSENEKLKNLVSSLEEKIGETEKRYEEASKVSEERLKQALDAESKIIQLKTAMQRLEEKFLDMESENQVLRQQTLITSSVKPMSEHLSNHVYEKLGNGHHVVEEQKSAESVTPTKMFGTESDSKLRRSYIERQHENVDALVNCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLFLLQQSLKSGGASDTTPVKKPPNPTSLFGRMTMGFRSSPSSANLPAPALEVVKKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIYTQTFSYINVQLFNSLLLRRDCCTFTNGEYVKAGLAELELWCAQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDNSSIPFSVDDLSTALQEKEFSDMKPAEELLENPAFQFLNE	1512

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g01179	1512	PANTHER	MYOSIN	6	1510	-	-
	Aip02g01179	1512	ProSiteProfiles	Myosin motor domain profile.	62	733	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip02g01179	1512	ProSiteProfiles	IQ motif profile.	784	813	IPR000048	GO:0005515
	Aip02g01179	1512	CDD	MyosinXI_CBD	1108	1481	IPR037975	GO:0007015
	Aip02g01179	1512	SMART	MYSc_2a	57	734	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip02g01179	1512	ProSiteProfiles	IQ motif profile.	759	788	IPR000048	GO:0005515
	Aip02g01179	1512	Gene3D	Kinesin motor domain	65	663	IPR036961	-
	Aip02g01179	1512	PRINTS	Myosin heavy chain signature	92	111	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip02g01179	1512	PRINTS	Myosin heavy chain signature	149	174	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Aip02g01179	1512	PRINTS	Myosin heavy chain signature	197	224	IPR001609	GO:0003774\|GO:0005524\|GO:0016459

Showing 1 to 10 of 46 entries

Previous1 2 3 4 5Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g01179	Aip-Chr2	23721623	23738211	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g01179	1	1511	Myosins gene family	AT5G43900	76.121	0.0	2374

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g01179	K10357		-	gmx:100791070	2721.81

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip02g01179	02	23721623	23738211	Aip02g01179	02	23721623	23738211	ECH
	Aip02g01179	02	23721623	23738211	Aip06g01494	06	25231182	25241680	PCT

Showing 1 to 2 of 2 entries