Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01177 ATGATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGTCGCCGCTGGAGGAGCTTCGCTCTTCGCCGCCGCCGTGGAGGGGAAAGAGGAGATGCTCCCTCGCCAGTCACCGTCGTGCTTCCTGGAAATCGAAGTTTTACAGATTCAACAAGGAAAGGAACCGGTGGAAGGAGAGAACCGATGGTGCCGTCAAGTTCCCTAAGAACAAGGTTAGTAGCAGGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAATAAGCTTACAGTGAACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGAAAGAAATAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTTCGTCGCTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGTCGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTATAA 630 0.4619 MMREEEPSPNASSPLEELRSSPPPWRGKRRCSLASHRRASWKSKFYRFNKERNRWKERTDGAVKFPKNKVSSRGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVNKNLIEVFADGVNQDMVVLMAARASRLENQDAIDCAIVSMLADPKKEIGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFAGVFPEHKYEIVKRL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01177 209 PANTHER PLASMA MEMBRANE ATPASE 153 209 - -
Aip02g01177 209 PANTHER CALCIUM-TRANSPORTING ATPASE 153 209 - -
Aip02g01177 209 Pfam RanBP1 domain 42 139 IPR000156 GO:0046907
Aip02g01177 209 MobiDBLite consensus disorder prediction 1 36 - -
Aip02g01177 209 Gene3D - 70 89 - -
Aip02g01177 209 PANTHER CALCIUM-TRANSPORTING ATPASE 68 153 - -
Aip02g01177 209 PANTHER PLASMA MEMBRANE ATPASE 68 153 - -
Aip02g01177 209 SUPERFAMILY HAD-like 81 105 IPR036412 -
Aip02g01177 209 ProSitePatterns E1-E2 ATPases phosphorylation site. 95 101 IPR018303 -
Aip02g01177 209 Gene3D - 90 104 IPR023214 -
Aip02g01177 209 Gene3D - 154 209 IPR023214 -
Aip02g01177 209 Gene3D - 105 153 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01177 Aip-Chr2 23711387 23714193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01177 153 209 Primary Pumps ATPases AT3G47950 77.586 1.35e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01177 K01535 - ahf:112729871 241.891