Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01176 ATGACTGGTGACGGAGTGAATGATGCACCAGCTTTGAAGATAGCAGACATAGGTATCGCTATAGCAGATGCAACAGATGCTACAAGAAGTGCCTCTGATATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGATGTATCTATCACCATCCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTTAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGGTATTACTATCTGCTCTCAAATACCATATTTAAAATGCATTATTTGGAGGTCTTCTCTACAGTTATAG 369 0.3821 MTGDGVNDAPALKIADIGIAIADATDATRSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYDVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDGITICSQIPYLKCIIWRSSLQL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01176 122 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Aip02g01176 122 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Aip02g01176 122 SUPERFAMILY HAD-like 1 96 IPR036412 -
Aip02g01176 122 Gene3D - 40 105 - -
Aip02g01176 122 Gene3D - 1 39 IPR023214 -
Aip02g01176 122 PANTHER CALCIUM-TRANSPORTING ATPASE 1 104 - -
Aip02g01176 122 PANTHER PLASMA MEMBRANE ATPASE 1 104 - -
Aip02g01176 122 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g01176 122 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01176 Aip-Chr2 23710808 23711365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01176 1 101 Primary Pumps ATPases AT3G47950 90.099 4.46e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01176 K01535 - aip:110271527 211.075