Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01159 ATGGAAGCCATGTTTGTGATCAACCTCGGAGATAAAGCGCACGTGCCCATTCTCACGTTCTCAGAAATGAGCCCTTCTCTCTCATCACTCCACACCCCATACTTGTTCCAAATTGCAAAGAAAGATTATTATTTCACTCAAGTCGAGGCCATAAGCGCCATTGTTCAAGCTTTTGGGTGGAAACAAGTGGTTCCAATATACGTGGACAACGGTTATGGCGAAGGACTCATTGCATCCCTAACCAATTCATTTCAGAAAGCATACATTCGTGTTCCTTATCTCAGCGCCATTGATTTCTCAGCCACAAATGATGCCATTGAGAGAGAGCTCTACAAGCTCATGACTATGCAAACTGGAGTCTTTGTTGTTCACATGACATCCCGTCTTGCCTCTCGTCTCTTCACCATTGCCAAAGACATTGGAATGATGGATGAAGGTTATGTTTGGATTGTGACTGCTGGAATCGCTAATCTCTTTAACTCATTGGACTCTTGGGTTATGAAATCCATGGAAGGTGTGCTGGGTGTTAGGCCTTATATTCCAAGAACAAAACAGCTTCTTGATTTTAGAGCTCGATGGAAAAGAGAGTTCTTAAGAGACAATCCAACACCTGTTGATGTTAATTTGGATGTTTTTGGAATATGGGCCTATGATGCTACTGCTGCATTAGCCATGGCAGCTGAGAAGCTTGACAACACTGTTTTCGGCTTCACTAATGTGAGCAACAACTCCAGCAACGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAACGGCGAGAAGCTGAGGGAAGCTTTATCAAATGTTAGATTCAAAGGTGTTGATGGTGAGTTCAAAGTAGTGGGTGGTGGCCTGAAGGGACTAATCAGAGACATGGATGCAAATAATTCAACTTCTAAGGAGAATCTAAGAACAATTCTATGGCCAGAGGACTCTTACTCTGTTCCAAAGGGATGGGAAATTCCTACAAATGGTAACAAGTTAAAGATAGGAGTCCAGTGA 1002 0.4301 MEAMFVINLGDKAHVPILTFSEMSPSLSSLHTPYLFQIAKKDYYFTQVEAISAIVQAFGWKQVVPIYVDNGYGEGLIASLTNSFQKAYIRVPYLSAIDFSATNDAIERELYKLMTMQTGVFVVHMTSRLASRLFTIAKDIGMMDEGYVWIVTAGIANLFNSLDSWVMKSMEGVLGVRPYIPRTKQLLDFRARWKREFLRDNPTPVDVNLDVFGIWAYDATAALAMAAEKLDNTVFGFTNVSNNSSNVTDLENFGVSRNGEKLREALSNVRFKGVDGEFKVVGGGLKGLIRDMDANNSTSKENLRTILWPEDSYSVPKGWEIPTNGNKLKIGVQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01159 333 Pfam Receptor family ligand binding region 3 279 IPR001828 -
Aip02g01159 333 PANTHER OS06G0188250 PROTEIN 1 332 - -
Aip02g01159 333 Gene3D - 45 208 - -
Aip02g01159 333 PANTHER OS06G0188250 PROTEIN 1 332 - -
Aip02g01159 333 SUPERFAMILY Periplasmic binding protein-like I 3 280 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01159 Aip-Chr2 23318113 23319197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01159 1 332 Ion Channels AT2G24720 43.370 1.78e-97 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01159 K05387 - lja:Lj0g3v0303259.1 404.06