Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01140 ATGTTGGATGAAGAAGCCGGTGACTATGGAGATGTATTGCAGTTGAGTAAGGAAGAGATAATGAGTAAGGCATTCCGAAGCGATGAAGCAGCATATGAATTTTATAGGAGGTTCGGCAAATATTTTGGTTTTGGTATTCGGAAGGGTGACTCAGGAAAAGATGAAAGTGGAAGGGTTATTTGTAGGAGATTTTTTTGTAATAGAGCGGGTCTAAGACAACGTCATCACTATGATACGCTAGATAGGCCGAGAGGTCACAGACCGGAAACGCACACAAATTGTGAGGCGAAGCTGTCAGTCTACCTTGATGTGGTCAGTGGTATATGGAAGGTGAGAAAAATAGTATTGGATCATAACCATGATTTAACTCCGGCATATATGGTTCATATGATGACGAATTTTAGAGAAATAAGTTGTTCTGCCAAGGCACAAATATCTGGTATGCAAGCTCATGGTATTCCGACGTCTAAGATTCTGGGGTATATGGCTGGACAGGCTGGTGGCTATTCTCTAATGGGCTTCACTAAGAAGGATGCATACAATTATATTAACAAGGCTAAGCGTGCAAAGATTATAGATAGGGACTCTAATGCCGCTGTTGTATATCTGGAGGGAAAAGCGGGGGCCGATCCGATGTCGATGGCTAGCAAGAAGCCGTCAGTTGTAGTCACGGATGGCTGTGATTCAATGAAAGCTGCAATCAAGTATGTTTTTCTGGAGGTAACACATCGATTGTGTGCTTGGCATATGGAGAAGAACGTAACCACTAATGTGAAGGAAGAGAGACTGCGGCAATGTTTCACCCGGTGGCTGTACTCAGATATGAAAATAGATGAATTTGAGGCTGAGTGGGATGATGCCATTGAAGAGTATGGGTTGCAAAATAGTTTTTGGGCCAAAGAAACTTTTCAGAAGAGGATGATGTGGGCTAATGCGTATCTACAAGACAAGTTTTGTGATGGTTTTCGGACAACATCCCGATCATTTCATGGGATGCCGGTAATGACAACTTGTTTGGATCCTCTTGAAAAGTATGCTACAGATGTATACACACGGGAGATATTCATTGATGCGAAGAAGGAAATAGTGGGTGTCGGTGCAGTTAATTTTTTAGCCAAGATTAGACGTTCTACCACAATGGTGTACACATTAGAGGAATATGGCGACCCAGGTAGAGAGATCTTGGTGTTGTACGATAGGATTCCTGAAAGGTTGGTTCTGAAGAGGTGGTGCAAGGATGCAAAGTCATTGGATAAATATGCCGAGATAACGGAAGTTGGTAGTGAAAGGGGTTTCTTGTTGCGCCATGGAGCACTTCATGCAGTCGCACAGTGGATGCTATATGTTGGAGCTAGGATCCCATCATCATTCACACATGCGCTTAACGGTCTCCATACACTCTGCCAGGAACTGGATAGCTACCATGAAAATGTCCGTCAGAAGAAAGCAAACGATACGGTTGATTTACATGACCCTGATGTGGTGAAGACTAAGGGTGCCCCTCGTGTTAGAAGGCAGGCCGGAAGGATGAGGCGCTGCACCTGTTGCCGGAAAACAGGGCACACAAAACGGCACTGTAATGCAGACCGTGCCTTTGTCCGATTCGACAAGGGCAACAAGGGTGATCCTAAACCTAACAAATTGGCTATGCAGGTAGAGTTAGAGGAATCGGGTTCCAAGAATAGATTAAAAGATGAAATACCTGCTGCAACTGGGTGTAATGAGACTATGGAATCTGACAGGAACGTGAGAAGTAACACAAATGAGTTACTAACACAGCTGATGACTCAAATAATTGATATCAGTGCAAGACTGGGTTCGAGGCTCCCAGCATAA 1836 0.4406 MLDEEAGDYGDVLQLSKEEIMSKAFRSDEAAYEFYRRFGKYFGFGIRKGDSGKDESGRVICRRFFCNRAGLRQRHHYDTLDRPRGHRPETHTNCEAKLSVYLDVVSGIWKVRKIVLDHNHDLTPAYMVHMMTNFREISCSAKAQISGMQAHGIPTSKILGYMAGQAGGYSLMGFTKKDAYNYINKAKRAKIIDRDSNAAVVYLEGKAGADPMSMASKKPSVVVTDGCDSMKAAIKYVFLEVTHRLCAWHMEKNVTTNVKEERLRQCFTRWLYSDMKIDEFEAEWDDAIEEYGLQNSFWAKETFQKRMMWANAYLQDKFCDGFRTTSRSFHGMPVMTTCLDPLEKYATDVYTREIFIDAKKEIVGVGAVNFLAKIRRSTTMVYTLEEYGDPGREILVLYDRIPERLVLKRWCKDAKSLDKYAEITEVGSERGFLLRHGALHAVAQWMLYVGARIPSSFTHALNGLHTLCQELDSYHENVRQKKANDTVDLHDPDVVKTKGAPRVRRQAGRMRRCTCCRKTGHTKRHCNADRAFVRFDKGNKGDPKPNKLAMQVELEESGSKNRLKDEIPAATGCNETMESDRNVRSNTNELLTQLMTQIIDISARLGSRLPA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01140 611 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 213 328 IPR031052 GO:0006355
Aip02g01140 611 Pfam FAR1 DNA-binding domain 33 123 IPR004330 -
Aip02g01140 611 PANTHER OS02G0262500 PROTEIN 213 328 - -
Aip02g01140 611 PANTHER OS02G0262500 PROTEIN 19 210 - -
Aip02g01140 611 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 210 IPR031052 GO:0006355
Aip02g01140 611 Pfam MULE transposase domain 214 253 IPR018289 -
Aip02g01140 611 Coils Coil 609 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01140 Aip-Chr2 22640269 22642892 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01140 FAR1 3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01140 - - aip:107627033 803.512