Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01133 ATGGTCTCGCTAGTCGTTATGTCGCCATCCTTCGCGCCCGTGGTGTCGCCATCCTTCGCGCCCGTGGTGTCGCCATCCTCAGCTCCATCGTCTTCATCTTCTCAAGTCTCAACACCAGCACGCAGTAGCCTCTCATCGGCGGTCCTCAACAGTCAACACCGGCATATCGGCGTGAAGTGGAGTCACAATTTTACCGGTCATCTAAAAGACGAAGAGAGAGATTTGATCAGTTATCCAAGTGGCGGTGGTAGTAGTGGTCTTTATGCTGCATCTCTTTCTTCTGCTGATCAGGGTGGGAATGAAGGTGAAGATCATCCCACCGAAGCAGATTTGCAACAAGTTCTTGACTGCATGGAGGAAGAATCCGTGGCGGACGAATGTTACCGGCCGTTGTCTGCTGAAGAAGAGGGAGGCGATGGAAGCGATGCCTTCGGCCCAGGTGGCGACGAATTCGGTGACGAATTTGAGGATGGGGAATTAGGGGTGGAGTCGGATGCAGAGGATAATTTCGGGGATAGCTTCTTTGACAAGTGGGAAGAGAGAGCAGTGGACAGCATTGCAGAGCTGGGGTGTATAAATTTCAAGGAAATAACTGCAAAGGAGATTTTAATGTGTCATTTTCTGGATCGATCGGTGGCATTCTTGTTTTACAGTTTGTATGCGAAGATGAATGGTTTCGCTGGGTTCAGAGGAATGGGGTCCGTTAACGACGGCATGCAACGGAAACGTGAGCCAAAGGCGGAGACCAGATGCGGCTGTGAGGTAGAGATGTGCGTCCACGTGCACTTCGAAAGTGGTAGATGGATAATATCATACTTTCAAGACGTTCACAACCACAAGTTGCTGGACGATAGACTGACTTTCATGCTATCGGGCCATAGGAAAATGGATGCAGCCACCCTGGAACAAATGAACATGATGCCTAGAGTTGGGATTAAAACGCCACAGATTTATTCATCTTTTGTGCAGACTGCCAGGGGATTCCAAAACCTTTCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGTATTGGAGGCTCATTGGTGGGGATGCGACGGCTTGCCTTAAGTTCCTGGAATCAACGACGCAGGCTAATCCTGGAATGTTTGTGCGTTATTTGGCGGACAAGGATGGTCGTTTGGTGCACCTGTTTTGGTCGGATAATTGCAGTCAGCTGGATTATGGTTTGTTTGGGGATGTCATGGCATTTGATGCGACATATCGGAAGAATAAGTATATGTGTCCACTGTTCCTGGACGCCATGAAGGGTAAAGCACCTGGGTGTGTGATAACAGATGGGCATAGAGCGATGAAAAAGGCAATCGAAGCGGTGTCTCCTGGGGCCTATCACCGTTTGTGTGCGTGGCATCTGCTGAGGAATGCCACTTCTAACCTAAGCAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGCTGTTCGATTATAAGGTGTGGGAGTTTGAAGATCATTGGCATTATATGGTGGATGCGCTTGGTCTGTCTGATAATCAATGGGTTTCTGACCTTTACTCTAGGAGAAGGATGTGGGCAACTGCACATATAAGGGGCAACTTCTTTGGGGGTTTTCGTACAATGTCAAGGTGTGAAGGATTGCACTCAATGCTGGGTAAATTTGTCCAGTCTCGTCATAATTTGAGGGACTTTGTTGAGCAGTTTATGCGTTGCATATCCCAAATGAGGTCCAGGGAAGCACACTCTGATCTGTTATCCATGGTTGGGGAACCAGTGCTACAGAGTCCATTTCATGATTTGGAGAGGTCAGCTGCAAAGAAGCTCACAAGGGCAATTTTCTTCAACTTCAGGCCGATGCTTTTCCGCGCTTGCACATTGAAGGTACGAACACACACATGGAGCCAGACTTCTGATACATTCACTTTGTCTAGGTCAGCTAATGCGCGTAGGGAGTGGCAAGTGTGTCACTATGGTGACAGTAACAATTTCAAGTGCTCTTGCTTGCGAATGGAGTCCCTTGGTATACCGTGTGATCCCATTGTAGCAGTGCTGGTACATTTGGAGATGACTGACATACCAGACAGTCTTGTTCTGGATCATTGGTCCAAGAGTGCTCGCTCGAAAGTAAGGGCCTTTGTGGAGAAAGGTCTGTTTTGCTGGGATATCTCTGCCAACATTTAA 2160 0.4787 MVSLVVMSPSFAPVVSPSFAPVVSPSSAPSSSSSQVSTPARSSLSSAVLNSQHRHIGVKWSHNFTGHLKDEERDLISYPSGGGSSGLYAASLSSADQGGNEGEDHPTEADLQQVLDCMEEESVADECYRPLSAEEEGGDGSDAFGPGGDEFGDEFEDGELGVESDAEDNFGDSFFDKWEERAVDSIAELGCINFKEITAKEILMCHFLDRSVAFLFYSLYAKMNGFAGFRGMGSVNDGMQRKREPKAETRCGCEVEMCVHVHFESGRWIISYFQDVHNHKLLDDRLTFMLSGHRKMDAATLEQMNMMPRVGIKTPQIYSSFVQTARGFQNLSFLKRDMYNQIGKYWRLIGGDATACLKFLESTTQANPGMFVRYLADKDGRLVHLFWSDNCSQLDYGLFGDVMAFDATYRKNKYMCPLFLDAMKGKAPGCVITDGHRAMKKAIEAVSPGAYHRLCAWHLLRNATSNLSNPRFTSEFKKCMLFDYKVWEFEDHWHYMVDALGLSDNQWVSDLYSRRRMWATAHIRGNFFGGFRTMSRCEGLHSMLGKFVQSRHNLRDFVEQFMRCISQMRSREAHSDLLSMVGEPVLQSPFHDLERSAAKKLTRAIFFNFRPMLFRACTLKVRTHTWSQTSDTFTLSRSANARREWQVCHYGDSNNFKCSCLRMESLGIPCDPIVAVLVHLEMTDIPDSLVLDHWSKSARSKVRAFVEKGLFCWDISANI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01133 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 232 417 IPR031052 GO:0006355
Aip02g01133 719 Pfam FAR1 DNA-binding domain 231 282 IPR004330 -
Aip02g01133 719 ProSiteProfiles Zinc finger SWIM-type profile. 633 681 IPR007527 GO:0008270
Aip02g01133 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 418 700 IPR031052 GO:0006355
Aip02g01133 719 PANTHER OS02G0262500 PROTEIN 418 700 - -
Aip02g01133 719 Pfam MULE transposase domain 420 462 IPR018289 -
Aip02g01133 719 MobiDBLite consensus disorder prediction 132 156 - -
Aip02g01133 719 PANTHER OS02G0262500 PROTEIN 232 417 - -
Aip02g01133 719 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01133 Aip-Chr2 22358256 22362824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01133 FAR1 1.3e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01133 - - aip:107627027 1023.85