Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01119 ATGATCCGTTTCAAGTTTGATCCTGCAGCTGGTTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACGAATCGGATCTTTCCAACTCAAGTATCTCGACGATGAAGACGAATGGATGATGATGGTAAATGACTCAGATGTGGAAGAATGCATAGAAATATTGGATGATCTTGGCACCCGTGCTGTGAAATTTCTTGTTTGCGAAATGCCTAGTGGTTTGAGCAGCCGTGGATttaaaacaatttaa 255 0.4 MIRFKFDPAAGCLQLYEEVATRFKLRIGSFQLKYLDDEDEWMMMVNDSDVEECIEILDDLGTRAVKFLVCEMPSGLSSRGFKTI 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01119 84 SUPERFAMILY CAD & PB1 domains 2 74 - -
Aip02g01119 84 ProSiteProfiles PB1 domain profile. 1 72 IPR000270 GO:0005515
Aip02g01119 84 Gene3D - 1 73 - -
Aip02g01119 84 Pfam PB1 domain 3 69 IPR000270 GO:0005515
Aip02g01119 84 PANTHER PROTEIN NLP8 2 81 IPR045012 GO:0003700
Aip02g01119 84 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01119 Aip-Chr2 22129617 22129871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01119 2 80 NLP Transcription Factor Family AT2G43500 60.759 1.42e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01119 - - aip:107632302 149.058