Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01118 ATGCCTGGTGGAAAGCCTATATCTATTACTGACCAAGAGATTGTAGAGATGATACTCTTTCCAATAGTGAACGAGGCATGCCATGTTTTATATGAAGGAATGGTTATTCAAGCATCAGACCTCGACATTGCTTGTGTTCTTGGGATGAGCTTCCCTAGTTACAGCTTTTTGGTTGGGGCAAAGCATGTATATAACAGCCTAAAGAAATGGTCAGAATTATATGGTAACTTCTATAAGCCATCAAGTGAGGGGATAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGGCGTAAAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTAGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTAAACATTATCTCGAGGAAGGGCAAGTCAGGCTAAGGAGTACTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATCGAAGTCAAGAACAGCAACTTTTATTAGACAATCTATCAGGTACTATGCAGAGAAAGTGTCAGACTTTGAGGAAAGTTTCGGATGCTGAATTATACGGGATAGAAGGCTCGAGTTTTTCCTGTATGTCCTTGACAAACAATGAAACTGAAACTGCTCATAACCAGGATATGGAGGGATCAAGAAAGCAGATTGAGAAAAAGAGAAGTCCAGTGAAGAAGAATGTTAGCTTGAGTGTTCTCCAGCAATACTTCTCTGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGTTTGCCCAACAACCCGGAAAAGGATATGCAGGCAACACGGAATTGCAAGATGGCCATCGCGCAAGATTAATAAAGTTAATCGTTTAAAAAAAATACAAACCGTGCTTAACTCGGTCCAGGGTGTGGAAGGAGGACTGAAGTTTGATCCTTACACGGGGGGACTTATGTCAGGTGGATCAATCAACCAAGAAATTAATGCACGTAAAAGTTCTCTCTTTCAGAAGAAATGTTCTGTAAAACATCCTGATCCTGCAGCGAAAGATGCAGTCACCATATCTCCGGCATTTGGAAGCAAAGATTCAAAACCAATAGCCAAGGATGATGGTGGATTATGCCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTAGATGTGATGTAGCATATCATAGTCCAAACTCCCTGGTTGCTGATGAGATGGAAACTTATCTGAATGGGGCTGACAAGCTCGGCGAGCATCACAATCCTACTACTTCAAGCATGACAGACTCGTCAAATGGAAATTTGAGAATCGGAAACATTTGA 1296 0.4043 MPGGKPISITDQEIVEMILFPIVNEACHVLYEGMVIQASDLDIACVLGMSFPSYSFLVGAKHVYNSLKKWSELYGNFYKPSSEGIGDEASRIRIKDGRKIPGEKTVLCIEESASYINDIVVGGFVHACVKHYLEEGQVRLRSTHTNDDDYIIEFFLPVNMNRSQEQQLLLDNLSGTMQRKCQTLRKVSDAELYGIEGSSFSCMSLTNNETETAHNQDMEGSRKQIEKKRSPVKKNVSLSVLQQYFSGSLKDAAKSLVCPTTRKRICRQHGIARWPSRKINKVNRLKKIQTVLNSVQGVEGGLKFDPYTGGLMSGGSINQEINARKSSLFQKKCSVKHPDPAAKDAVTISPAFGSKDSKPIAKDDGGLCQEPFPVSILESSRCDVAYHSPNSLVADEMETYLNGADKLGEHHNPTTSSMTDSSNGNLRIGNI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01118 431 ProSiteProfiles RWP-RK domain profile. 215 304 IPR003035 -
Aip02g01118 431 PANTHER PROTEIN NLP8 82 137 IPR045012 GO:0003700
Aip02g01118 431 PANTHER PROTEIN NLP8 200 358 IPR045012 GO:0003700
Aip02g01118 431 MobiDBLite consensus disorder prediction 408 431 - -
Aip02g01118 431 PANTHER PROTEIN NLP8 138 200 IPR045012 GO:0003700
Aip02g01118 431 MobiDBLite consensus disorder prediction 409 431 - -
Aip02g01118 431 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 200 358 - -
Aip02g01118 431 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 9 84 IPR008927 -
Aip02g01118 431 Pfam RWP-RK domain 235 282 IPR003035 -
Aip02g01118 431 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 138 200 - -
Aip02g01118 431 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 82 137 - -
Aip02g01118 431 Gene3D - 9 86 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01118 Aip-Chr2 22122302 22129551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01118 82 326 NLP Transcription Factor Family AT3G59580 46.201 2.55e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aip02g01118 RWP-RK 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01118 - - aip:107627019 678.707