LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g01109	ATGGACGCAGGTAGGAGAAGACTTCCTCATGCACTAGGGCATATTGGGAGGAACAACGATGTTGTCCGCGTTATCAAACCGGCTGGGGAACCGTCACAACCACTGCACATACCCTTCCCAAATGATCTCCTCCCGAAATCTAGCAAACATGTTTACCTAACAGTCTCCGACGGGGTGCATAGAACATACAAGATTGGATGTAGCGCGAACGTCTTGGGTGAGATCACACTCGAAAGGGGGTGGGAAAGGTTTTATTGTGACTACAAGCTTCGTCCTAATGACTTTCTGCTATTGAAGCACAAGGGCCTCGATGACTTTGATGTGCGTATCTTTGAATCACCTGGAGTGGAGAGGTCTTACGTTCCATCTGGAGGTGAATCCAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCTTCCAAACACTCCTCCACTGCATCAGCCTCGAACGGGTTGCATCAATATTCCTAGGAGCGCGGCTGCGTCTGAGGTGGCACAGACATTTCACTCTGATCACCCATTCTTTCCAAATGTACCACACTTTGGCCACGACGTTGGTGACAATGTCATGGTCACTCTGCGTGCAGGGGATATCTCTGTTCGAGCAGCCTACAGCCGATACGGGGGCAAGCGAAGAGGCAACTATGGCACCATCACAGGAGGCTGGGGGGAATTCTTGAAGCTGTGCAATATCAACGATGATCAATTGGCTATTTTTGAGATATCGAGGACTAACCCGGAGGTGGTGCTCTTGGTTCAGTTTGTTGATTATGAGTAA	777	0.4981	MDAGRRRLPHALGHIGRNNDVVRVIKPAGEPSQPLHIPFPNDLLPKSSKHVYLTVSDGVHRTYKIGCSANVLGEITLERGWERFYCDYKLRPNDFLLLKHKGLDDFDVRIFESPGVERSYVPSGGESSNRGTPQVPNTLPNTPPLHQPRTGCINIPRSAAASEVAQTFHSDHPFFPNVPHFGHDVGDNVMVTLRAGDISVRAAYSRYGGKRRGNYGTITGGWGEFLKLCNINDDQLAIFEISRTNPEVVLLVQFVDYE	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g01109	258	MobiDBLite	consensus disorder prediction	122	136	-	-
	Aip02g01109	258	MobiDBLite	consensus disorder prediction	119	146	-	-
	Aip02g01109	258	Gene3D	-	18	114	IPR015300	-
	Aip02g01109	258	SUPERFAMILY	DNA-binding pseudobarrel domain	38	113	IPR015300	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g01109	Aip-Chr2	21838215	21839552	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g01109	33	135	REM Transcription Factor Family	AT4G31650	33.333	5.09e-07	48.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g01109	-		-	adu:110277012	478.404