Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01107 ATGAATGATTTTGCTGTGAGGAAGAATAAGATTCAACGGAATGTGAAGAATGAGGTTACACAACAAGAATTTGTATGTTTTCGGCAAGGCTCAAGAGATATAAGATTTGTTAACGACGGATTGCGACAGAACCGTGAGCCGAAGGCGGAGACTAGATGCGGTTGTGAGGCAGAGATGCGAGTTCACGTGCATTCAGAAAGTGGTAGATGGATAATATTGTACTTTCAGGAAGTTTACAACCACAAATTTTTAGAGGATAGACTAACCTGCAAGCAACGGAGGCTCATAGGTGGGGATGCGATGTCTTGCCTTAAGTTCTTGGAATCCACAGCGCAAGAGAATCCAGGAATTCAGCTGGATTATCGTTTGTTTGGGGATGTCGTACCATTTGATGTGACATATCGGAAGAATAAGTACGTGTGTCCACTGGTTGTGTTCTTTGGAGTCAATCACCATAACAAAACCAATGTGTTTGCTGCTATGCTAGTTGCAAATGAGAATGAGCATACTTACACCTAG 519 0.4239 MNDFAVRKNKIQRNVKNEVTQQEFVCFRQGSRDIRFVNDGLRQNREPKAETRCGCEAEMRVHVHSESGRWIILYFQEVYNHKFLEDRLTCKQRRLIGGDAMSCLKFLESTAQENPGIQLDYRLFGDVVPFDVTYRKNKYVCPLVVFFGVNHHNKTNVFAAMLVANENEHTYT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01107 172 Pfam MULE transposase domain 127 172 IPR018289 -
Aip02g01107 172 Pfam FAR1 DNA-binding domain 4 84 IPR004330 -
Aip02g01107 172 PANTHER OS02G0262500 PROTEIN 3 85 - -
Aip02g01107 172 PANTHER OS02G0262500 PROTEIN 118 171 - -
Aip02g01107 172 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 85 IPR031052 GO:0006355
Aip02g01107 172 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 118 171 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01107 Aip-Chr2 21656196 21656928 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01107 FAR1 1.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01107 - - aip:107627014 286.96