Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01106 ATGGCCTCAGGTAGGAGAAGACCTCCTCATGCACTAGGGCATATTGGGAGGAACAACGATGTCGTCCGAGTTATCAAATCGGCTGGGGATCCGTCGCGACCACTGCATATACCCTTCCCAAATGATCTCCTCCCGAAATCTAGCAAACATGTATACCTAACAGTCTCCGACGGGGTGCAGAGAACATACAAGATTGGATGTAGCTCGAACGTCTTCGGTGAGATCACGCTCGAAGGGGGGTGGGAAAGGTTTTATTGTGACTACAAGCTTCGTCCCAATGACATTCTGCTGTTGAAGCACAAGGGCCTCGATGACTTTGATGTGCGTATCTTTGAATTATCCGGAGTGGAGAGGTCTTATGTTCCGTCTAGAGGTGAATCCAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCCTCCAGTGCATCTGCCTCGAACGGGTTGCATCAATATTCCTAGGAGCGCGGCTGCGTCTGAGGTGGCACAGACATTTCGCTCTGAACACCCATTCTTTGTAATGCACATCACAAGAAGGCTATTACTTGTCCACTTCCTGGGGATATCTCTGTTCGAGCAGCCTACAGCCGATACGGGGGCAAGCGAAGAGGCAAGGGGGGAATTCGTGAAGCTGTGCAACATCAACGATGATCAATTGGCTGTTTTTGAGATATCGAGGACTAACCCGAAGGTGGTGCTCTTGGTTCAGTTTGTTGATTATGAAGGTGAATCCAGCAACAGAGGAACCCCCCAGGTTCCAAACACTCCTCCAGTGCATCTGCCTCGAACGGGTTGCATCAATATTCCTAGGAGCGCGGCTGCGTCTGAGGTGGCACAGACATTTCGCTCTGATCACCCATTCTTTGTAATGCACATCACAAGAAGGCTATTACTTGTCCACTTCCTGCCAAATGTACCACACTTTGGCCACGACGTTGGTGACAATGTCATGGTCACTCTGTGTTCAGGGGATATCTCTGTTCGAGCGGCCTACAGCCGATACGGGGGCAAGCGAAGAGGCAACTATGGCACCATCACAGGAGGCTGGGGGGAATTCGTGAAGCTGTGCAACATCAACAATGATCAATTGGCTATTTTTGAGATATCGAGGACTAACCCGGAGGTGGTGCTCTTAGTTCAATTTTTTGATTATGAGTAA 1155 0.4996 MASGRRRPPHALGHIGRNNDVVRVIKSAGDPSRPLHIPFPNDLLPKSSKHVYLTVSDGVQRTYKIGCSSNVFGEITLEGGWERFYCDYKLRPNDILLLKHKGLDDFDVRIFELSGVERSYVPSRGESSNRGTPQVPNTPPVHLPRTGCINIPRSAAASEVAQTFRSEHPFFVMHITRRLLLVHFLGISLFEQPTADTGASEEARGEFVKLCNINDDQLAVFEISRTNPKVVLLVQFVDYEGESSNRGTPQVPNTPPVHLPRTGCINIPRSAAASEVAQTFRSDHPFFVMHITRRLLLVHFLPNVPHFGHDVGDNVMVTLCSGDISVRAAYSRYGGKRRGNYGTITGGWGEFVKLCNINNDQLAIFEISRTNPEVVLLVQFFDYE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01106 384 Gene3D - 21 115 IPR015300 -
Aip02g01106 384 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 47 121 - -
Aip02g01106 384 SUPERFAMILY DNA-binding pseudobarrel domain 37 114 IPR015300 -
Aip02g01106 384 MobiDBLite consensus disorder prediction 122 143 - -
Aip02g01106 384 MobiDBLite consensus disorder prediction 122 136 - -
Aip02g01106 384 Gene3D - 268 384 IPR015300 -
Aip02g01106 384 PANTHER B3 DOMAIN-CONTAINING 47 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01106 Aip-Chr2 21569101 21571771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01106 31 135 REM Transcription Factor Family AT4G31650 31.818 9.38e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01106 - - adu:110277012 403.675