Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01105 ATGAAGTTGTACAAAGGGTATTGTCACGTTTTATGGTTTGCAGATTTATCTTTGGCAATGGCAAATTGTAGAGCAGAACAGACGATGGCCTGCATGGAGGGAGAATCGGTGATGAACCATTCTGATGGGTCACTCTGTGCTAAAGAGGAGAGAAGCGATGCCTATGGTCCCGGTAGTAACAAATTTGAGGATGGGGGATTAGGAGTGGACTCAAAGTCACGTGAGTATTTTGGGGACAATTTCTATGACAACTGGGAAGAGAGAGCCGTCGACGGTATTGCAAAGCTTGGATGTATTAATTTCAAAGAAATAACCGCTGAGATTATGATGTGTCATTTTTCGGATCGATCAGTTGCATTTTTGTTTTACAGTTTGTATGCGAAAATGAATGGTTTTGCTGTGAGGAAGAATAAAATTCAACGGAATGTGAAGAATGAGGTTACACAACAAGAATTTGTATGTTTTCGGCAGGGCTCAAGAGATATAGGGTTTGTTAACGACGGATTGCGACAGAAACGTGAGGCGAAGGCGGAGACTAGATGCGGTTGTGAGGCAAAGATGCGAGTTCACGTGCACTTAGAAAGTGGTAGATGGATAATATCGTACTTTCAGGAAGTTTACAACCACAAATTTTTAGAGGATAGACTAACCTGTATGCTATCGGGGCATAGGAAAATGGATGCAGTCATTGTGGAACAAATGAACATGATGCTGAAAGTTGATATTAAAATGCCACAGATTTATTCGTCTTTTGTGCACACTGGTGAGGGATTCCAAAATGTTCCCTTTCTAAAGAGGGATATGTATAACCAGATAGGCAAGCAACGGAGACTCATAGGTGGGGATGCGATGTCTTGCCTTAAGTTCTTGGAATCCACAGCGCAAGAGGATCCAGGAATATATGTGCGTATTTGGCCGACAAGGATGGTCGTCTGCTTCCAACAAGCTCACAAAAGAGATTTTCTTCTTATTCAGTCCGATGCTTTTCCGGACTTGTACTCTGAAGTAACATTTTCAAGTGCTCGTGCTTGCGGATGGAGTCTCTGGTCTAAGAATGCTCGCTCCAAAGTAAGGGCATTTGTGGAGAAAGCTCTGTTTTGCTGGGATTCAACGATCACGTTGGATGCTGAATTAAAGTGCAGGGAAATGTGTGTTCTGCAATATGGAGATGAAGCTGAATTTGTTGACATGATGGATAAAGTTTGTTGTGAGATATCGCGGCTGAAAGAGAAAAAAGATTGTGGTGATCTAGGAGATCGGAATAAAGTTCGGAAAGCATCAACATTAGAGGGGTGCGTGAGGGATCCACAAATGGCTCGGCATCCAAAGTGGCAAAGAAAGGACGCAAACCACACATTGGTGAAGGGTGTCAAGAGGTGCAATATTTGTCACCATATAGGCCATAATCGATTATCTTGCCAGTTAAACCCTAATAGTCGAAGAAATACACAAGAAGGTGCATCATATTTTGGTACTGAGGGTGAGGACGAGACTGGAATGATCGGTGACTCATCCGAGGAGATGGCGTGGAATGGTGCAACAGAGTTTGGATTGGCCGAGGACTATAACTCAGAGGGAGAAATATCATATCCATACTTCAACTGA 1605 0.4299 MKLYKGYCHVLWFADLSLAMANCRAEQTMACMEGESVMNHSDGSLCAKEERSDAYGPGSNKFEDGGLGVDSKSREYFGDNFYDNWEERAVDGIAKLGCINFKEITAEIMMCHFSDRSVAFLFYSLYAKMNGFAVRKNKIQRNVKNEVTQQEFVCFRQGSRDIGFVNDGLRQKREAKAETRCGCEAKMRVHVHLESGRWIISYFQEVYNHKFLEDRLTCMLSGHRKMDAVIVEQMNMMLKVDIKMPQIYSSFVHTGEGFQNVPFLKRDMYNQIGKQRRLIGGDAMSCLKFLESTAQEDPGIYVRIWPTRMVVCFQQAHKRDFLLIQSDAFPDLYSEVTFSSARACGWSLWSKNARSKVRAFVEKALFCWDSTITLDAELKCREMCVLQYGDEAEFVDMMDKVCCEISRLKEKKDCGDLGDRNKVRKASTLEGCVRDPQMARHPKWQRKDANHTLVKGVKRCNICHHIGHNRLSCQLNPNSRRNTQEGASYFGTEGEDETGMIGDSSEEMAWNGATEFGLAEDYNSEGEISYPYFN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01105 534 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 87 240 - -
Aip02g01105 534 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 87 240 - -
Aip02g01105 534 Pfam FAR1 DNA-binding domain 122 212 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01105 Aip-Chr2 21565657 21568366 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g01105 FAR1 3.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01105 - - adu:107493030 411.379