Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01104 ATGGAGGGTTCAGATTTTCTAAATAGTATCTCAGCTTCAATATTATCAAAACATTTCTCGGACTCTGAGATTCTATCCGACACGATCCTAGGATTGCCATTTTTGGAACTTGCTGCAATCTGCGTGAACCTTACCCTTGTTGTGTTGTTCCTCTTTGTTGTATCCGTGAGGAAGATTTGTGTGTGCGAAGGTCGGATTCGAATTAATAAGGAAAACGGCATCGCCACCAGCACCACCACCATTAATGGAAACAATGGCATTGATGGTGAAGTTCAAATAGGTTCAATGTTCAAGTTCTCAGTGTTCTCTTGTTTCTATGTCCTTTTTGTTCAAGTTGTGGTGCTTGGTTTCGATGGGGTTTCTTTGATTTCAAATGGGGCTAATGGAAAACATGTGAACTGGTTCCTTCTATTTGTGCCATCTGCACAAGGTTTGGCTTGGTTTGTGTTGAGCTTCTCAGCATTGCAATGCAAGCTCAAAGTTTCTCATAAGTTCCCTTTTCTCTTGAGGGTTTGGTGGTTATTGTCCTTTGTTATCTGTTTGTGCAATTTGTATGTTGACGTGAGAGGTCTTTATATGGAAGGTCCCAAATACCTTTCCACTCGCGTAGTTGCAAATTTCGCCGTCGCTCCGGCGCTTGCATTCTTGTCTGTGGTTGCAATTAGGGGTGTTACCGGTATACAAGTTTGTGTGGACCCTGATCTTCAGGAGCCATTGCTTGTTGAAGAGGAGACGGGTTGTCTCAAGGTTACACCTTATAAAGATGCCGGAATTTTCAGCTTGGCCACGCTTTCGTGGCTGAATCCGCTTCTTTCCGTTGGTGCAAAGAGACCCCTCGAGCTTAAGGACATTCCCCTTGTAGCGCCCAAGGATAGAGCCAAGACTAGTTATAAGATTTTGAACTCAAATTGGGAGAGATTGAAGGCTGAAAACCCCTCTAAGCAGCCTTTGTTAGCTTGGGCGATTCTCAAGTCGTTTTGGAAGGAAGCAGCCGTGAATGCCATCTTTGCAGGTCTGAATACTTTGGTAGCTTATGTTGGTCCATATATGATAAGTTACTTTGTTGATTACTTGGGTGGCATAGAGACTTTTCCTCATGAAGGCTATGTCCTCGCGGGAATATTCTTTGCTGCAAAGCTTGTGGAAACGCTGACGACTCGGCAGTGGTATCTAGGAGTGGACATCTTGGGTATGCATGTCAGATCGGCTCTAACGGCGATGGTGTACCAAAAGGGGCTAAGGCTGTCGAGCTCAGCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAATTACATGGCTGTTGATGTTCAGAGGGTAGGGGATTACTCTTGGTATCTTCACGACATGTGGATGCTTCCGATGCAGATTGTTCTTGCTCTTCTAATTTTGTACAAGAGTGTTGGAATAGCTGCCATTGCAACATTGATTGCTACAATAATTTCCATTGTTGTAACTGTTCCTGTGGCTAGAATACAAGAAAATTACCAAGATAAATTGATGGCTGCTAAGGATGAAAGGATGAGAAAGACATCAGAGAGTTTAAGGAATATGAGGATTCTCAAGCTACAAGCTTGGGAAGACAGGTATCGTATACAATTGGAGGAAATGCGTGGAACGGAATACAAGTGGCTGAGGAAAGCGCTCTATTCTCAGGCTTTCATAACCTTCATATTCTGGAGCTCCCCGATTTTTGTGTCGGCAGTCACTTTTGCTACTTGCATATTGTTGGGTGGTCAGCTGACAGCAGGCGGTGTCCTTTCTGCCCTGGCTACATTTCGGATCCTCCAAGAACCTCTGAGAAACTTTCCGGACTTGGTGTCAACGATGGCTCAGACAAAAGTTTCGCTTGATCGGATAACTAGTTTTCTGCAGGACGAAGAATTGCAGGAAGATGCAACTATCGTCTTGCCACCAGGCATGACTGACACTGCCGTAGAGATCAAGGATGGTGTCTTCTGCTGGGACCCTTCTTTGTCTAGGCCTACACTGTCAGGAATACATATGAAAGTCGAAAAGGGCATGCGTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCGGGTGAAGTTAAAGTATGTGGCACTGCTGCATATGTCTCCCAATCAGCATGGATACAGACAGGAAATATAGAAGAAAATATCCTCTTTGGAAATGCGATGGACAAACCAAGGTACAAGAAGGTTATTCATGCTTGTTCACTGAAGAAGGACCTAGAGCTTTTCTCACATGGAGACCAAACAATTATCGGTGATAGAGGTATAAACCTCAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTTTATCAAGATGCTGATATTTATCTCCTTGATGATCCCTTTAGTGCAGTTGATGCCCACACCGGATCGGATTTGTTCAGGGAGTATGTATTGACAGCATTAGCCAAAAAAACAGTCATTTTTGTGACGCATCAAGTTGAATTTCTGCCTGCTGCTGATCTGATACTGGTCCTTAAAGAAGGACAAATCATACAGGCCGGAAAATATGATGAGCTTCTACAAGCTGGAACAGATTTTAAGACTCTAGTTTCAGCTCATCATGAAGCAATAGAGGCTATGGATATTCCTTCTCACTCAGATGAATCAGATGAAAACATGTCCCCAGATAGATCTATTATGACAGAAAAGAGATCCTCTGCTTCACTCGACATTGATGGTCTAGCAAAGGAAGTGCAAGAGGGATCATCCGATCAGAAGGCAATCAAGGAGAAAAAGGCAAAGCGCTCAAGGAAAAAACAACTTGTTCAAGAAGAGGAGAGGGTTAGAGGTCGTGTGAACATGAAGGTTTACTTGTCGTACATGGCTGCAGCATATAAAGGCTTATTGATTCCGCTCATAATTATGGCACAATCATTATTTCAGTTCCTTCAGATTGCTAGTAACTGGTGGATGGCTTGGGCAAATCCTCAAACTGCTGGAGACGAGCCAAAAGTAACTCCAACTGAGCTTCTTCTCGTGTACATGGCCCTTGCTTTTGGCAGCTCATTGTTCATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTTGCTGCTGCGCAAAAATTATTTTTCAGCATGCTCAGAAGTATTTTCCGTGCACCAATGTCTTTCTTTGACTCTACACCATCTGGAAGGGTCCTGAATCGGGTTTCTGTTGATCAAAGTGTTGTGGATCTCGACATTCCTTTTCGACTTGGAGGGTTTGCTTCAACAACAATACAGCTCATAGGAATTGTTGCTGTAATGACAACAGTTACATGGCAAGTTTTCCTCCTGGTTATCCCAATGGCTATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGAATTGTAAGCATCCAAAAATCTCCAATAATACATCTTTTCGGTGAATCAATTGCGGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTTTACCTTTTGGATTGTTTTGCACGGCCATTCTTTTGCAGCCTTGCAGCTATTGAGTGGCTATGCTTGCGCATGGAATTACTCTCCACTTTTGTGTTTGCTTTCTGTATGGTACTACTTGTAAGTGTTCCCCATGGAAGTATTGACCCCAGCATGGCTGGACTTGCCGTGACGTATGGCCTGAATTTGAATGGACGTCTATCTCGGTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCTATCGAAAGGATTTATCAGTACAGCCAAGTTCCTAGTGAAGCACCTGCAATTGTTGATGATTCTCGTCCTCCGTCCTCATGGCCCGAGAATGGAACAATCCAAATAGTTGATTTGAAGATACGATACAAGGAAAATCTTCCCAGGCACTGGATAAGTCTCAGCTTGGAGAGGTTATTCGATCAAAAGGACAAAAGCTTGATACGCCGGTTCTAG 3969 0.4376 MEGSDFLNSISASILSKHFSDSEILSDTILGLPFLELAAICVNLTLVVLFLFVVSVRKICVCEGRIRINKENGIATSTTTINGNNGIDGEVQIGSMFKFSVFSCFYVLFVQVVVLGFDGVSLISNGANGKHVNWFLLFVPSAQGLAWFVLSFSALQCKLKVSHKFPFLLRVWWLLSFVICLCNLYVDVRGLYMEGPKYLSTRVVANFAVAPALAFLSVVAIRGVTGIQVCVDPDLQEPLLVEEETGCLKVTPYKDAGIFSLATLSWLNPLLSVGAKRPLELKDIPLVAPKDRAKTSYKILNSNWERLKAENPSKQPLLAWAILKSFWKEAAVNAIFAGLNTLVAYVGPYMISYFVDYLGGIETFPHEGYVLAGIFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKSVGIAAIATLIATIISIVVTVPVARIQENYQDKLMAAKDERMRKTSESLRNMRILKLQAWEDRYRIQLEEMRGTEYKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRITSFLQDEELQEDATIVLPPGMTDTAVEIKDGVFCWDPSLSRPTLSGIHMKVEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVKVCGTAAYVSQSAWIQTGNIEENILFGNAMDKPRYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYVLTALAKKTVIFVTHQVEFLPAADLILVLKEGQIIQAGKYDELLQAGTDFKTLVSAHHEAIEAMDIPSHSDESDENMSPDRSIMTEKRSSASLDIDGLAKEVQEGSSDQKAIKEKKAKRSRKKQLVQEEERVRGRVNMKVYLSYMAAAYKGLLIPLIIMAQSLFQFLQIASNWWMAWANPQTAGDEPKVTPTELLLVYMALAFGSSLFIFVRAVLVATFGLAAAQKLFFSMLRSIFRAPMSFFDSTPSGRVLNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVAVMTTVTWQVFLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSVPHGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQVPSEAPAIVDDSRPPSSWPENGTIQIVDLKIRYKENLPRHWISLSLERLFDQKDKSLIRRF 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01104 1322 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 87 1300 - -
Aip02g01104 1322 Pfam ABC transporter 663 797 IPR003439 GO:0005524
Aip02g01104 1322 MobiDBLite consensus disorder prediction 877 901 - -
Aip02g01104 1322 Coils Coil 492 512 - -
Aip02g01104 1322 Gene3D ABC transporter type 1, transmembrane domain 927 1266 IPR036640 GO:0005524|GO:0016021
Aip02g01104 1322 Gene3D ABC transporter type 1, transmembrane domain 303 628 IPR036640 GO:0005524|GO:0016021
Aip02g01104 1322 MobiDBLite consensus disorder prediction 877 894 - -
Aip02g01104 1322 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Aip02g01104 1322 CDD ABC_6TM_ABCC_D2 966 1260 IPR044726 GO:0140359
Aip02g01104 1322 Gene3D - 639 873 IPR027417 -
Aip02g01104 1322 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g01104 1322 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 87 1300 - -
Aip02g01104 1322 MobiDBLite consensus disorder prediction 916 938 - -
Aip02g01104 1322 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 334 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g01104 1322 Coils Coil 924 944 - -
Aip02g01104 1322 SUPERFAMILY ABC transporter transmembrane region 965 1271 IPR036640 GO:0005524|GO:0016021
Aip02g01104 1322 Pfam ABC transporter transmembrane region 977 1208 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g01104 1322 Pfam ABC transporter transmembrane region 335 599 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip02g01104 1322 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524
Aip02g01104 1322 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 868 IPR003439 GO:0005524
Aip02g01104 1322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 867 IPR027417 -
Aip02g01104 1322 CDD ABCC_MRP_domain1 645 845 - -
Aip02g01104 1322 SMART AAA_5 672 853 IPR003593 -
Aip02g01104 1322 SUPERFAMILY ABC transporter transmembrane region 320 630 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01104 Aip-Chr2 21554227 21561376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01104 645 901 Calmodulin-binding Proteins AT2G36910 28.623 4.55e-21 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01104 02 21554227 21561376 Aip02g01104 02 21554227 21561376 ECH
Aip06g01457 06 24431556 24438760 Aip02g01104 02 21554227 21561376 PCT