Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01094 ATGCAGGGTGTTACTATTATTCCTACTGGCGGTAGTGGTGGTGGTTCCACCATGTCTTCTACTTTGTCAAAGGAAGACACGAACTTGGTTCTTTCTTCTGAGGACTCTTCTTGCCCTGAAGATTCTGAGTTGCTTGAACTTGGTCTTGGATTAGGCCTATCTCATCATCATAAACCTGCTCCTAAATCACACAGTCATCATCATCATCATGCTAGAATTTTGACTGCTAAGGATTTTCCTTCTTCAGCTTCAGCTTCTTCATCATCTTCATCTTCACCTCCTTCTTCTTCTTTGAGCAGGGTAAACAACACCACCACCACCTCCACTTCTGGCACCAAGAGAACTGCTGAGTCTGTTGCTGCTGCTAATAATGGACCTAGTCCGGTAGTTGGATGGCCTCCCCTCAGAAGACCATACAGAGTGAATAGCTTTAATCATTCAAAATCGCCAGCCACCGAGGTGTTCAACTCGAATTCTGAGAAGAGTAAGAGCAGCGAAACTGATGTGCTAAGGAAGAATGCTGATAATACCAATGGTAATAACAACAACATTGATACCAAAGAAAAAAGAAACTTCCGGAGTTCCTTGTTTGTCAAGGTAAATATGGACGGAATAGCAATTGGAAGGAAGGTCGATTTGAGTGTCCATAGTTCTTATGAAACCTTAGCTCAAACATTGGAGGATATGTTTAGAGAATCAACTACAGCAATCACTTTCAATGGATCAAACGGAGAAGACTTCGGTATTCTTGTTGGAGGAGATCAACACTCAAAATTGCTGGATGGATCTTCGAAGTTTGTGCTAACTTATGAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCCTTAGCTCAGTGAGGAGGCTTAGAATCATGAGAACATCTGAGGCCAATGGAAATGGACTTGCACCAATGTTGGAAGAAAAGAACTGCAGACAGAAAAGCAAGCCCATATAG 975 0.4267 MQGVTIIPTGGSGGGSTMSSTLSKEDTNLVLSSEDSSCPEDSELLELGLGLGLSHHHKPAPKSHSHHHHHARILTAKDFPSSASASSSSSSSPPSSSLSRVNNTTTTSTSGTKRTAESVAAANNGPSPVVGWPPLRRPYRVNSFNHSKSPATEVFNSNSEKSKSSETDVLRKNADNTNGNNNNIDTKEKRNFRSSLFVKVNMDGIAIGRKVDLSVHSSYETLAQTLEDMFRESTTAITFNGSNGEDFGILVGGDQHSKLLDGSSKFVLTYEDKDGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGNGLAPMLEEKNCRQKSKPI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01094 324 Gene3D - 190 310 - -
Aip02g01094 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 310 IPR003311 GO:0005634|GO:0006355
Aip02g01094 324 MobiDBLite consensus disorder prediction 171 185 - -
Aip02g01094 324 MobiDBLite consensus disorder prediction 142 163 - -
Aip02g01094 324 ProSiteProfiles PB1 domain profile. 195 302 IPR000270 GO:0005515
Aip02g01094 324 MobiDBLite consensus disorder prediction 1 42 - -
Aip02g01094 324 SUPERFAMILY CAD & PB1 domains 189 298 - -
Aip02g01094 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 22 310 - -
Aip02g01094 324 MobiDBLite consensus disorder prediction 1 38 - -
Aip02g01094 324 MobiDBLite consensus disorder prediction 79 187 - -
Aip02g01094 324 Pfam AUX/IAA family 46 305 IPR033389 -
Aip02g01094 324 MobiDBLite consensus disorder prediction 79 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01094 Aip-Chr2 21282548 21286501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01094 158 303 B3 DNA Binding Superfamily AT1G59750 28.082 3.63e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aip02g01094 AUX_IAA 4.3e-58 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01094 K14484 - gmx:100527033 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01094 02 21282548 21286501 Aip02g01094 02 21282548 21286501 ECH