Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01079 ATGGAAGAACAGAATATATCATTACTTTCTCCACTATCACCACTGCCACCACCATCTTTATTGTCTATACCCACTACCATCACCCAAGATTTCAGCTTTTTCAATGATACCTTCTTTGAAAAGCCACTTTCTGGCTTGGTAAACGTTGGAGACTTTGGTCCTTCCTTATATGAGTGGTTAGACATCGTAGAAGAAGATGCCCCGCCAACTGAAACGCCAATAAAGCATCCTCTTCCATCGTTGTCTCCATACGTACTTATTCTAGAATCTTCTGAAGTAGTTGCACAGTCACAAAATCCAGTCCTTTCCATAATTCCATCCAATCTTGAGGTGGTCGTTTCTAACAATAACTTCACCAACAACAGAGTTGGAGGGtgGTTGAAACTTCGAGCATCAACGATGGCATTGGTTGCTGATACCATGAGCATGAACAACAAAAGGAATAAAAATAATCTTTCGAAAATTACTTACTTGACAGAGAGCGAGTCTGAAAACCTCGAAGATGGTTATAAATGGCGTAAGTACGGCAAAAAATCACTCAAAAAGAGCCCTTTCCCAAGAAGCTACTATCGTTGCACTGCAATTGGTTGCAATACGAAGAAGCGGTACATGGATGATCCCACCCATGTCCTAACCACCTATGTGGGTGCACGCTCACGATTTGCCACCAATCCTCCCCCCTCTATCAAGATCTTTCAACCTCTACAATAG 711 0.4205 MEEQNISLLSPLSPLPPPSLLSIPTTITQDFSFFNDTFFEKPLSGLVNVGDFGPSLYEWLDIVEEDAPPTETPIKHPLPSLSPYVLILESSEVVAQSQNPVLSIIPSNLEVVVSNNNFTNNRVGGWLKLRASTMALVADTMSMNNKRNKNNLSKITYLTESESENLEDGYKWRKYGKKSLKKSPFPRSYYRCTAIGCNTKKRYMDDPTHVLTTYVGARSRFATNPPPSIKIFQPLQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01079 236 ProSiteProfiles WRKY domain profile. 161 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01079 236 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 146 217 - -
Aip02g01079 236 SMART WRKY_cls 166 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01079 236 SUPERFAMILY WRKY DNA-binding domain 161 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01079 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 217 IPR044810 GO:0003700
Aip02g01079 236 Gene3D WRKY domain 153 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01079 236 Pfam WRKY DNA -binding domain 167 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01079 Aip-Chr2 20622024 20624842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01079 144 222 WRKY Transcription Factor Family AT2G47260 50.000 4.26e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip02g01079 WRKY 2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01079 - - aip:107627000 384.8