Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01078 ATGGCATCGGTTGCTAATACCATGAGCATGAACAACAAAAGGAATAAAAATAATCTTTCGAAAATTACTTACTTGACAGAGAGCGAGTCTAAAAACCTCGAAGATGGTTATAAATGGCGCAAGTACGACAAAAAATCATTCAAAAAGAGCCCTTTCCTAAGAAGCTACTATCGTTGCACTGCAATTGGTTGTAATGCAAAGAAGAGAATGGAGCGGTACGTGGATGATCCCACCCATGTCCTAACCACCTATGTGGGTTTGCACGCTCACGATTTGCCACCAATCCTCACCCCTCTATCAAGATCTTTCAACCTCTACAATAGCTCCACCGTTAGCCCCAAATTTAGCAGAGGAAGCGGTGTACAAAAACTTGTACTTTCAGATGCAAGTGCAGGTGCAAGGAAAAGAAAGCATGCCAATAACATTATTACTAGTGTTAATGTTAGAACTGACAGTGATAGTTGTGTTAATGACATTGGCTCAAATGAGGATATTGTTATTCTAGAATCTTCTGAAGTAGTTGCACAGTCACAAAATCCAGTCCTTTCCACAATCCCATCCAATCCTGAGGTGACCGTTTCTAACAATAACATCACCAACAAGAGAGTTGGAGGGCTTAAACATTCAGCAGAATCAATTGTTAGTGGAAATGGAAATCTGAGAGGCGATGAAACAGATGATGAAGAAGATAATATTATAACTAGGTTGAAACTTCGAGCATCGACGATAGCATCGGTTGCTGATACCATGAGCATGAACAACAAAAGGAATAAAAATAATCTTTCAAAAATTACTTACTTGACAGAGAGCGAGTCTGAAAACCTCGAAGATGGTTATAAATGGCACAAGTATGGCAAAAAATCACTCAAAAAGAGCCCTTTCCCAAGTGCAATTGGTTGCAATGCGAAGAAGAGAGTGGAGCGGTACATGGATGATCCCACCCATGTACTAACCACCTATGTGGGTTTGCATGCTCACAATTTGCCACCAATCTTCCTTCCTCCATCAAGATCTTTCAACTTCTACAATAACTCCACCGTTAGTCCCAACCTTTGTAAAGGAAGCAGTGTAAAAAAATCTGTACTTTCAGATGCAGGTGCAAGTGCAAGGGAAAGAAAGCATGCCAATAACACTATCACTAGTGTTAATGTTAGAACTGACAGTGATAGTTGTGTTAATGACGTTGGCTCGATTGAGGATATTGGTACCGGACTGCTTGAGGATATTGTTAATTTGTCATCAATATCACCTCATTATCAACATTATCAACCAACATCTCTATAG 1284 0.3995 MASVANTMSMNNKRNKNNLSKITYLTESESKNLEDGYKWRKYDKKSFKKSPFLRSYYRCTAIGCNAKKRMERYVDDPTHVLTTYVGLHAHDLPPILTPLSRSFNLYNSSTVSPKFSRGSGVQKLVLSDASAGARKRKHANNIITSVNVRTDSDSCVNDIGSNEDIVILESSEVVAQSQNPVLSTIPSNPEVTVSNNNITNKRVGGLKHSAESIVSGNGNLRGDETDDEEDNIITRLKLRASTIASVADTMSMNNKRNKNNLSKITYLTESESENLEDGYKWHKYGKKSLKKSPFPSAIGCNAKKRVERYMDDPTHVLTTYVGLHAHNLPPIFLPPSRSFNFYNNSTVSPNLCKGSSVKKSVLSDAGASARERKHANNTITSVNVRTDSDSCVNDVGSIEDIGTGLLEDIVNLSSISPHYQHYQPTSL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01078 427 SUPERFAMILY WRKY DNA-binding domain 28 93 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 SUPERFAMILY WRKY DNA-binding domain 270 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 Pfam WRKY DNA -binding domain 276 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 Pfam WRKY DNA -binding domain 34 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 ProSiteProfiles WRKY domain profile. 270 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 176 412 - -
Aip02g01078 427 Gene3D WRKY domain 18 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 Gene3D WRKY domain 260 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 12 116 - -
Aip02g01078 427 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 176 412 IPR044810 GO:0003700
Aip02g01078 427 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 116 IPR044810 GO:0003700
Aip02g01078 427 ProSiteProfiles WRKY domain profile. 28 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 SMART WRKY_cls 33 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g01078 427 SMART WRKY_cls 275 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01078 Aip-Chr2 20525319 20528256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01078 3 353 WRKY Transcription Factor Family AT2G37260 31.129 4.08e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip02g01078 WRKY 1.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01078 - K18835 aip:107626999 796.193