Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01060 ATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGGAACTCAATGTCATGGGGATGTCTGGAGTACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTAGACCTTTAACTCATTCCGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAACATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGCCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCTGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGACATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGACCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGAGCCATTCCAGGTTTCAAAACCATCTTTGCAATTACCAGGACATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTTCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCCGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCATCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGTCATCACTAGATTTGAAAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAGTTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCACAGTTGTGGAAGGCTCAGTGGAAATAAGAGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGACGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1458 0.4321 MEARPSISIERSSAEELNVMGMSGVLSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSRPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSSHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMTSEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKEPFQVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSFSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMSSLDLKTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDSYKPGPDQAIGSTTVVEGSVEIRGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01060 485 MobiDBLite consensus disorder prediction 461 475 - -
Aip02g01060 485 Gene3D - 259 318 - -
Aip02g01060 485 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 260 314 IPR006447 GO:0003677
Aip02g01060 485 MobiDBLite consensus disorder prediction 422 485 - -
Aip02g01060 485 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
Aip02g01060 485 Pfam MYB-CC type transfactor, LHEQLE motif 346 391 IPR025756 -
Aip02g01060 485 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Aip02g01060 485 MobiDBLite consensus disorder prediction 111 140 - -
Aip02g01060 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Aip02g01060 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 482 IPR044848 GO:0003700
Aip02g01060 485 MobiDBLite consensus disorder prediction 201 263 - -
Aip02g01060 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 25 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01060 Aip-Chr2 19589920 19595583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01060 1 410 G2-like Transcription Factor Family AT4G28610 46.604 1.59e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip02g01060 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01060 - - aip:107624999 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01060 02 19589920 19595583 Aip02g01060 02 19589920 19595583 ECH
Aip06g01439 06 23790740 23797720 Aip02g01060 02 19589920 19595583 PCT
Aip06g01088 06 16020842 16024908 Aip02g01060 02 19589920 19595583 PCT