Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01041 ATGGAAACTGCACCCGCTTGCTTCTTCTGCGGTGGAATCCCTGCAACTGCAACTGCCACAGCGACATCAACTCCGAATTCTGTGCCTTTCCGTTGTGCCGTTAGAGTTCCCTTCTCTTCTTCGTTTGCCTCGCTCTGCCTGTTAGCTCGTACCAGGCACGGCGGCGGCGGCGGCGGCGCTTCTGTTTTCCGCTCTTTGTTCTCGTCGTCGTCTTCTTCGTCGGTCTCCGGCCTCGGCCTAATTCGAAGCGCCGCTAACAGCGAAACGAAGCTCCCGGCTCCAAGGAACGCTAAACGAAGTAGAAGAAGAACGCGGACGCCAACGGTTTCTCCTCCTACTCCTCGGCCTCCGTCTCCGGAGAAAACTAACAGTAACGGTAACGGTAACAGCAATGGGAATGGGGATCCTCTCGGGTGGAAGGATCTTGGGAAGAGTGTTGTGAGATGGATTAGGGAGAGCATGAGGGCCATGGCGTTGGATTTCGCGGCGGCGGAGTTGCAGGGGGAAGTGGAATTCGGGGAGTTGAGTCAGCGAATGGGACCTGGTCTGACTTTTGTGATCGAGGCCCAGCCTTATCTGAACGCTGTTCCGATGCCACTTGGGCTTGAAGTGATGTGCTTCAAGGCCTGCACACACTACCCAACTCTCTTTGATCACTTCCAGAGGGAGCTTCGGGAGGTTCTCCAGGACCTTCAGAATAAGTCCTTGCTACAAGACTGGCGCCAAACGCAGTCTTGGAAGCTGCTTAAAACTCTCGCCAATTCAGCTCAGCATCGAGCAGTGGCCAGAAAGATAGCCCATCCCCTGCCCAGGACTGTCCAAGGTGTTTTAGGAATGGACTTGGACAAGGTCAAAGCAATGCAGCAGAGGATTGAGGATTTCACCAACCGTATGTCTGAACTACTCCGTATTGAAAGGGATGCTGAATTGGAGTTCACTCAGGAGGAATTGGATGCTGTTCCTAGGCCTCTGGATGATGCTTCAGACCCCTCAAGACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAACTTAACTGCCATCAGTACCTCTACCGGACTTGGGGGAATGCATTTGGTGTTGTTCAAGGTTGAAGGCAACCATCGATTACCACCTACTACTCTTTCACCTGGAGATATGAGTCACGCCNNNNNNNNNNNNNNNNNNNNNNGTATTCAAGGACTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCTCTAATGCTGCTTCAGAAGAATGGTTTGCGGAAGAAGAATCCTTCAATTGCTGTTGTAGCTACACTTTTTGGAGAAGAGGAAGATGTTGCATGGCTTGAGAAGAATAATTTTGTTGACTGGGAAGAAGAAAAATTAAATGGACTGCTAGAAAATGAAACATTCGATAGTTCTCAGCAGCGAGCAATTGCATTGGGTTTGAATAAGAAGAGACCTGTATTGGTTATCCAAGGGCCTCCGGGTACAGGCAAGACTGGTTTGCTCAAGCAACTTATAGTATGTGCCGTTCAACAAGGTGAAAGGGTTCTAGTGACGGCACCTACGAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTCCGAGTTGGAAATCCTGCTCGTATTTCAAAAGCTGTGGGATCAAAGTCTTTAGGTGCAATTGTAAATGCAAAGCTTGCAAGTTTTCGAGAAGAGTATGAAAGGAAAAAGTCAAATCTAAGGAAGGATCTAAGACTTTGTTTAAAGGACGATTCACTAGCTGCAGGCATACGGCAACTTCTGAAACAGCTGGGAAGGTCTCTCAAGAAAAAAGAAAAACAGACTATGAATGAAGTTTTATCTAGTGCGCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGATCCCTTGATTCGAAGGCTAGATGCTTTTGACCTGGTTGTCATAGATGAAGCAGGACAAGCAATTGAACCATCTTGTTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTGTCCAGAAAGGCCTTAGAAGGTGGCCTAGGAATATCACTACTGGAGAGAGCTACAGCATTGCACGAAGGGATTCTAACCACCAGGCTAACAACACAATACCGTATGAATGATGCAATTGCTAGTTGGGCCTCAAAGGAGATGTACGGAGGATTGTTGAAGTCTTCTGAGTCTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACTTGGATAACCCAATGTCCACTGCTATTGCTTGATACAAGAATGCCATATGGAAGTCTGTCGGTTGGTTGCGGAGAGCATCTGGATCCAGCAGGAACAGGCTCATTTTATAATGAAGGAGAAGCTGATATAGTTCTGCAGCACGTCGTTTCCTTGGTTTATGCTGGTGTTAACCCAGCTGCCATTGTGGTGCAGTCCCCTTATGTCGCTCAAGTGCAGCTTCTGAGGGACATGCTTGATGAGGTACCTGAAGCTTCTGGTACTGAGGTTGCAACCATTGATAGTTTTCAAGGTCGCGAAGCTGATGCAGTAATTTTATCCATGGTACGGTCAAACACATTGGGAGCTGTTGGATTCCTTGGTGATAGCAGAAGAATCAATGTTGCCATCACAAGGGCACGCAAACATGTAGCCGTGGTCTGTGACAGCTCAACAATATGCCACAACACCTTCCTGGCAAGACTTCTGCGTCACATTCGACACTTTGGTCGGGTGAAGCATGCAGAACCAGGTAGTTTTGGGGGTTCTGGACTAGGGATGAACCCCATATTACCCTCCATTAATTAG 2835 0.4748 METAPACFFCGGIPATATATATSTPNSVPFRCAVRVPFSSSFASLCLLARTRHGGGGGGASVFRSLFSSSSSSSVSGLGLIRSAANSETKLPAPRNAKRSRRRTRTPTVSPPTPRPPSPEKTNSNGNGNSNGNGDPLGWKDLGKSVVRWIRESMRAMALDFAAAELQGEVEFGELSQRMGPGLTFVIEAQPYLNAVPMPLGLEVMCFKACTHYPTLFDHFQRELREVLQDLQNKSLLQDWRQTQSWKLLKTLANSAQHRAVARKIAHPLPRTVQGVLGMDLDKVKAMQQRIEDFTNRMSELLRIERDAELEFTQEELDAVPRPLDDASDPSRPIEFLVSHSQPQQELCDTICNLTAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMSHAXXXXXXXXIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVATLFGEEEDVAWLEKNNFVDWEEEKLNGLLENETFDSSQQRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKAVGSKSLGAIVNAKLASFREEYERKKSNLRKDLRLCLKDDSLAAGIRQLLKQLGRSLKKKEKQTMNEVLSSAQVVLATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATALHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSESVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCGEHLDPAGTGSFYNEGEADIVLQHVVSLVYAGVNPAAIVVQSPYVAQVQLLRDMLDEVPEASGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGSGLGMNPILPSIN 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01041 944 Pfam AAA domain 696 899 IPR041679 -
Aip02g01041 944 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 120 389 - -
Aip02g01041 944 MobiDBLite consensus disorder prediction 120 134 - -
Aip02g01041 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 907 IPR027417 -
Aip02g01041 944 MobiDBLite consensus disorder prediction 86 139 - -
Aip02g01041 944 SMART AAA_5 485 700 IPR003593 -
Aip02g01041 944 SMART ultradead3 466 718 IPR014001 -
Aip02g01041 944 Coils Coil 284 311 - -
Aip02g01041 944 CDD DEXXQc_SMUBP2 470 719 - -
Aip02g01041 944 Gene3D - 405 702 IPR027417 -
Aip02g01041 944 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 401 944 - -
Aip02g01041 944 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 120 389 - -
Aip02g01041 944 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 401 944 - -
Aip02g01041 944 Coils Coil 571 591 - -
Aip02g01041 944 CDD SF1_C_Upf1 720 916 IPR041679 -
Aip02g01041 944 Pfam AAA domain 470 686 IPR041677 GO:0004386
Aip02g01041 944 Gene3D - 718 926 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01041 Aip-Chr2 19181533 19187390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01041 456 659 Core DNA Replication Machinery Family AT1G08840 26.699 1.30e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01041 - - aip:107625008 1689.09